RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 PEBP4Q96S96 227 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 EMC7Q9NPA0 242 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 DHRS4L1P0CG22 281 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 CD46P15529 392 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 PTBP1P26599 531 aaKnown RBP eCLIP13.79□□□□□ -0.23e-9■■■■■ 49.6
CCDC50-201ENST00000392455 MFSD6LQ8IWD5 586 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 ZNF597Q96LX8 424 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 NKX1-2Q9UD57 310 aaPredicted RBP13.79□□□□□ -0.2
CCDC50-201ENST00000392455 ATXN7L1Q9ULK2 861 aaPredicted RBP13.79□□□□□ -0.2
CCDC50-201ENST00000392455 RPH3ALQ9UNE2 315 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 GPR17Q13304 367 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 OR2M3Q8NG83 312 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 PELI2Q9HAT8 420 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 SPACA1Q9HBV2 294 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.78□□□□□ -0.2
CCDC50-201ENST00000392455 G0S2P27469 103 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 GRPRP30550 384 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 BORCS6Q96GS4 357 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 ABHD6Q9BV23 337 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 GAREM1Q9H706 876 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 LILRB3O75022 631 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 S1PR4O95977 384 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 DIO3P55073 304 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 DHRS11Q6UWP2 260 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 NLGN4XQ8N0W4 816 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 OR52B6Q8NGF0 335 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 SLC6A20Q9NP91 592 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 GIMAP2Q9UG22 337 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 ENPP5Q9UJA9 477 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 ITGAMP11215 1152 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 SOX3P41225 446 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 GSCP56915 257 aaPredicted RBP13.78□□□□□ -0.2
CCDC50-201ENST00000392455 VEZF1Q14119 521 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 SLC14A2Q15849 920 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 TRAPPC2LQ9UL33 140 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 RICTORQ6R327 1708 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 LOC102723971A0A1B0GUV8 181 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 LRRC3CA6NJW4 275 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 RNGTTO60942 597 aaKnown RBP13.78□□□□□ -0.2
CCDC50-201ENST00000392455 SLC7A9P82251 487 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 LMAN2Q12907 356 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 VASNQ6EMK4 673 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.78□□□□□ -0.2
CCDC50-201ENST00000392455 STT3BQ8TCJ2 826 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 GGHQ92820 318 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 TSACCQ96A04 125 aaPredicted RBP13.78□□□□□ -0.2
CCDC50-201ENST00000392455 BMP2P12643 396 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 CCKARP32238 428 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 SRYQ05066 204 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 TATDN3Q17R31 274 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 OR51A2Q8NGJ7 313 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 ARHGDIGQ99819 225 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 B3GALNT1O75752 331 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 ADIRFQ15847 76 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 C6orf89Q6UWU4 347 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 SPHK2Q9NRA0 654 aa13.78□□□□□ -0.2
CCDC50-201ENST00000392455 BTN1A1Q13410 526 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 LSAMPQ13449 338 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 ZNF852Q6ZMS4 543 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 SIAH1Q8IUQ4 282 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 GNB4Q9HAV0 340 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 STRAPQ9Y3F4 350 aaKnown RBP13.77□□□□□ -0.2
CCDC50-201ENST00000392455 RING1Q06587 406 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 MLLT11Q13015 90 aaPredicted RBP13.77□□□□□ -0.2
CCDC50-201ENST00000392455 SPCS2Q15005 226 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 BARHL1Q9BZE3 327 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 PRDM4Q9UKN5 801 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 CYC1P08574 325 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 EMP2P54851 167 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 TBPL1P62380 186 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 Q6ZVL8 140 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 BPIFCQ8NFQ6 507 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 OR4K13Q8NH42 304 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 CIB3Q96Q77 187 aaPredicted RBP13.77□□□□□ -0.2
CCDC50-201ENST00000392455 NECAP2Q9NVZ3 263 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 EMC9Q9Y3B6 208 aa13.77□□□□□ -0.2
CCDC50-201ENST00000392455 TCAPO15273 167 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 TUSC2O75896 110 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 PMS2P2O95744 297 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 LTBQ06643 244 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 ZNF154Q13106 437 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 TPBGQ13641 420 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 IQCJQ1A5X6 159 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 RNF113BQ8IZP6 322 aaKnown RBP13.77□□□□□ -0.21
CCDC50-201ENST00000392455 MGAT3Q09327 533 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCDC50-201ENST00000392455 PRSS35Q8N3Z0 413 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 RAB3CQ96E17 227 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 INIPQ9NRY2 104 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 ENSAO43768 121 aaKnown RBP13.77□□□□□ -0.21
CCDC50-201ENST00000392455 HLA-DMAP28067 261 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 BAK1Q16611 211 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 DTX3Q8N9I9 347 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 CDS1Q92903 461 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 SGPP1Q9BX95 441 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 C1QTNF2Q9BXJ5 285 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 MOKQ9UQ07 419 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 OR6C68A6NDL8 312 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 IGLON5A6NGN9 336 aa13.77□□□□□ -0.21
CCDC50-201ENST00000392455 SORBS2O94875 1100 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms