RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 LMF2Q9BU23 707 aaKnown RBP8.86□□□□□ -0.99
COL6A3-204ENST00000392003 C11orf54Q9H0W9 315 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-204ENST00000392003 MMP28Q9H239 520 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 FAM240BA0A1B0GVZ2 78 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 LYPD3O95274 346 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 CSF2P04141 144 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 SBK2P0C263 348 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 EVX1P49640 407 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 FXYD6P3P58550 94 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 RAC1P63000 192 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 RIN1Q13671 783 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 ERV3-1Q14264 604 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 SLC2A12Q8TD20 617 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 UBASH3BQ8TF42 649 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 SMPDL3BQ92485 455 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 ARSGQ96EG1 525 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 SGTBQ96EQ0 304 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 HSPA12BQ96MM6 686 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 HDHD2Q9H0R4 259 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 RIMS4Q9H426 269 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-204ENST00000392003 RHPN2P1A8MT19 583 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 NDUFB2O95178 105 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 CSTAP01040 98 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 CD27P26842 260 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 EMDP50402 254 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 ATP12AP54707 1039 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 RNF4P78317 190 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 PSG6Q00889 435 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 PYHIN1Q6K0P9 492 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 DGAT2L6Q6ZPD8 337 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 NOXA1Q86UR1 476 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 ZNF248Q8NDW4 579 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 OR52E2Q8NGJ4 325 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 EDARADDQ8WWZ3 215 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 ADAMTS14Q8WXS8 1223 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 PTP4A1Q93096 173 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 ZPBPQ9BS86 351 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 HCAR1Q9BXC0 346 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 MEPEQ9NQ76 525 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-204ENST00000392003 KLHL1Q9NR64 748 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 FLRT3Q9NZU0 649 aa8.86□□□□□ -0.99
COL6A3-204ENST00000392003 RRP8O43159 456 aaKnown RBP8.85□□□□□ -0.99
COL6A3-204ENST00000392003 SGCEO43556 437 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 FOSL2P15408 326 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 CSTF1Q05048 431 aaKnown RBP8.85□□□□□ -0.99
COL6A3-204ENST00000392003 TMEM91Q6ZNR0 172 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 CEACAM19Q7Z692 300 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 CARFQ8N187 725 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 DEDD2Q8WXF8 326 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 MMABQ96EY8 250 aaPredicted RBP8.85□□□□□ -0.99
COL6A3-204ENST00000392003 TCTN2Q96GX1 697 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 C4orf36Q96KX1 117 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 ZNF649Q9BS31 505 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 RNF121Q9H920 327 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 DNAJB12Q9NXW2 375 aaKnown RBP8.85□□□□□ -0.99
COL6A3-204ENST00000392003 EXTL2Q9UBQ6 330 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 SLC23A1Q9UHI7 598 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 KLHL21Q9UJP4 597 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 IGHV1OR15-9A0A0B4J2B8 117 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 J3QRE1 110 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 ARHGEF9O43307 516 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 LY86O95711 162 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 SERPINA3P01011 423 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 HSF2Q03933 536 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 INSL4Q14641 139 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 NNATQ16517 81 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 DEFB133Q30KQ1 61 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 PAMR1Q6UXH9 720 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 CMIPQ8IY22 773 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 SHISA5Q8N114 240 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 MS4A15Q8N5U1 240 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 OR4N2Q8NGD1 307 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 FAM174AQ8TBP5 190 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 DCLRE1CQ96SD1 692 aaKnown RBP8.85□□□□□ -0.99
COL6A3-204ENST00000392003 PPA2Q9H2U2 334 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 PCDHB16Q9NRJ7 776 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 PRODH2Q9UF12 536 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 TDRD6O60522 2096 aaKnown RBP8.85□□□□□ -0.99
COL6A3-204ENST00000392003 EFCAB7A8K855 629 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 HCRTR1O43613 425 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 GYPBP06028 91 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 GUSBP08236 651 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 TRAPPC2P0DI81 140 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 TRAPPC2BP0DI82 140 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 PYCR1P32322 319 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 P2RY4P51582 365 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 GBX2P52951 348 aaPredicted RBP8.85□□□□□ -0.99
COL6A3-204ENST00000392003 FGFBP1Q14512 234 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 PRTGQ2VWP7 1150 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 HBMQ6B0K9 141 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 TPRA1Q86W33 373 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 ZNF440Q8IYI8 595 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 C10orf53Q8N6V4 93 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 RCBTB1Q8NDN9 531 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 OR4K13Q8NH42 304 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 KCTD12Q96CX2 325 aaKnown RBP8.85□□□□□ -0.99
COL6A3-204ENST00000392003 ZNF578Q96N58 590 aaPredicted RBP8.85□□□□□ -0.99
COL6A3-204ENST00000392003 TGM7Q96PF1 710 aa8.85□□□□□ -0.99
COL6A3-204ENST00000392003 MAP3K3Q99759 626 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms