RNA–Protein interactions for RNA: ENST00000391143.1

SNORA48.5-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.5-201ENST00000391143 EFR3AQ14156 821 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 EXOSC7Q15024 291 aaKnown RBP2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 EFNB3Q15768 340 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 GABRA6Q16445 453 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 ZNF239Q16600 458 aaKnown RBP2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 TMEM44Q2T9K0 475 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 C18orf21Q32NC0 220 aaPredicted RBP2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 GLYR1Q49A26 553 aaPredicted RBP2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 TMEM35AQ53FP2 167 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 ARL13AQ5H913 290 aaPredicted RBP2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 ARMCX4Q5H9R4 360 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 RABL3Q5HYI8 236 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 ZNF311Q5JNZ3 666 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 KLF17Q5JT82 389 aaPredicted RBP2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 ELFN2Q5R3F8 820 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 CASC10Q5T4H9 136 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 C6orf163Q5TEZ5 329 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 LIPMQ5VYY2 423 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 FAM91A1Q658Y4 838 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 OR4C11Q6IEV9 310 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 KRTAP5-3Q6L8H2 238 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 CGB2Q6NT52 195 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 GOLGA7Q7Z5G4 137 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 JAZF1Q86VZ6 243 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 SLC22A9Q8IVM8 553 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 WDR75Q8IWA0 830 aaKnown RBP2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 CTAGE3PQ8IX95 158 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 CMTM4Q8IZR5 234 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 WDR31Q8NA23 367 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 OR7G3Q8NG95 312 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 OR7G1Q8NGA0 311 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 OR2T11Q8NH01 316 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 FAM76AQ8TAV0 307 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 DUSP19Q8WTR2 217 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 SLC25A43Q8WUT9 341 aaPredicted RBP2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 ST8SIA2Q92186 375 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 CPNE4Q96A23 557 aaPredicted RBP2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 EFHD2Q96C19 240 aaPredicted RBP2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 ZG16BQ96DA0 208 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 SLC35A4Q96G79 324 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 ZNF681Q96N22 645 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 MUS81Q96NY9 551 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 MNTQ99583 582 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 LYSTQ99698 3801 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 DOK1Q99704 481 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 NPAS1Q99742 590 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 CCT7Q99832 543 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 MS4A8Q9BY19 250 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 SRXN1Q9BYN0 137 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 TRIM54Q9BYV2 358 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 ACPTQ9BZG2 426 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 SHCBP1LQ9BZQ2 653 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 RTN4RQ9BZR6 473 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 BRINP2Q9C0B6 783 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 TPK1Q9H3S4 243 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 TMEM185BQ9H7F4 350 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 CXorf36Q9H7Y0 433 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 LYARQ9NX58 379 aaKnown RBP2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 ING3Q9NXR8 418 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 PLEK2Q9NYT0 353 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 ZNF639Q9UID6 485 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 PHF11Q9UIL8 331 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 UTS2RQ9UKP6 389 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 NOTCH3Q9UM47 2321 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 VDAC3Q9Y277 283 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 CFL2Q9Y281 166 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 STK38LQ9Y2H1 464 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 ASB4Q9Y574 426 aa2.72□□□□□ -1.97
SNORA48.5-201ENST00000391143 TRBV5-3A0A0A0MS03 114 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 IGHV3-15A0A0B4J1V0 119 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 MDFIC2A0A1B0GVS7 189 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 TMEM129A0AVI4 362 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 POC1B-GALNT4F8VUJ3 575 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 K7EIL1 84 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 hCG_2039718K7EN88 272 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 PLPP1O14494 284 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 CLGNO14967 610 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 PGRMC2O15173 223 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 RGS16O15492 202 aaPredicted RBP2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 HOXA3O43365 443 aaPredicted RBP2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 PPIHO43447 177 aaKnown RBP2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 TMPRSS11DO60235 418 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 FADS1O60427 444 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 ULK1O75385 1050 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 NME6O75414 186 aaPredicted RBP2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 RSL1D1O76021 490 aaKnown RBP2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 SCAF4O95104 1147 aaKnown RBP2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 NDUFA7O95182 113 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 OTCP00480 354 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 SERPINE1P05121 402 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 GUSBP08236 651 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 ADRA2AP08913 450 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 MYZAPP0CAP1 466 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 CT45A8P0DMV1 189 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 CT45A9P0DMV2 189 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 NR2F6P10588 404 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 CPA3P15088 417 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 TAC1P20366 129 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 ACHEP22303 614 aa2.71□□□□□ -1.98
SNORA48.5-201ENST00000391143 ENPP1P22413 925 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms