RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 NUP214P35658 2090 aaPredicted RBP0.6□□□□□ -2.31
RNU6-1009P-201ENST00000390996 TENM3Q9P273 2699 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 RAD51BO15315 384 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 HSP90AB1P08238 724 aaKnown RBP0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 PRPS2P11908 318 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 NPR2P20594 1047 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 EWSR1Q01844 656 aaKnown RBP eCLIP0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 C12orf60Q5U649 245 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 UNQ9165/PRO28630Q6UXU0 137 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 SYT10Q6XYQ8 523 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 NLRP9Q7RTR0 991 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 TPRA1Q86W33 373 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 CNNM3Q8NE01 707 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 C1orf64Q8NEQ6 169 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 OR5AU1Q8NGC0 362 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 OR1N2Q8NGR9 330 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 PAGE5Q96GU1 130 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 DNAJC1Q96KC8 554 aaKnown RBP0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 VSTM2LQ96N03 204 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 TBCDQ9BTW9 1192 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 RHBGQ9H310 441 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 RHOJQ9H4E5 214 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 ZWILCHQ9H900 591 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 NUDT15Q9NV35 164 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 DHCR7Q9UBM7 475 aaKnown RBP0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 DNPEPQ9ULA0 475 aa0.59□□□□□ -2.31
RNU6-1009P-201ENST00000390996 KAT6BQ8WYB5 2073 aa0.59□□□□□ -2.32
RNU6-1009P-201ENST00000390996 COL11A1P12107 1806 aaPredicted RBP0.59□□□□□ -2.32
RNU6-1009P-201ENST00000390996 C12orf71A8MTZ7 269 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 LGALS8O00214 317 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 RALAP11233 206 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 FGF9P31371 208 aaPredicted RBP0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 AKT2P31751 481 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 RFC4P35249 363 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 GYG1P46976 350 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 TNFRSF9Q07011 255 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 SPP2Q13103 211 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 PDIA5Q14554 519 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 TTLL9Q3SXZ7 439 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 PARP15Q460N3 678 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 COA6Q5JTJ3 125 aaKnown RBP0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 LCN12Q6JVE5 192 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 CES3Q6UWW8 571 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 KDM7AQ6ZMT4 941 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 LRRC52Q8N7C0 313 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 PSMA8Q8TAA3 256 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 PNPT1Q8TCS8 783 aaKnown RBP0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 MRPS31Q92665 395 aaKnown RBP0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 FGF11Q92914 225 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 PTP4A1Q93096 173 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 NARS2Q96I59 477 aaKnown RBP0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 ECSITQ9BQ95 431 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 TM2D3Q9BRN9 247 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 ALG12Q9BV10 488 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 HMG20AQ9NP66 347 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 CNOT2Q9NZN8 540 aaKnown RBP0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 HMG20BQ9P0W2 317 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 STAP1Q9ULZ2 295 aa0.58□□□□□ -2.32
RNU6-1009P-201ENST00000390996 C12orf77C9JDV5 145 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 TRIM16O95361 564 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 UBTFL1P0CB47 393 aaPredicted RBP0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 SLC11A1P49279 550 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 HSPA2P54652 639 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 GFPT1Q06210 699 aaPredicted RBP0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 PLD1Q13393 1074 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 FZD2Q14332 565 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 MORF4L2Q15014 288 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 SLC26A11Q86WA9 606 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 TMEM17Q86X19 198 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 SNX32Q86XE0 403 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 TMEM104Q8NE00 496 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 GMCL1P1Q8NEA9 526 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 EXOC6Q8TAG9 804 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 ITCHQ96J02 903 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 TESK2Q96S53 571 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 SLC35A5Q9BS91 424 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 RIOK2Q9BVS4 552 aaKnown RBP0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 LINC00597Q9H2U6 94 aa0.57□□□□□ -2.32
RNU6-1009P-201ENST00000390996 IGHV3OR16-8A0A075B7F1 116 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 A0A1B0GUS0 222 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 IGLV6-57P01721 117 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 ABOP16442 354 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 CMA1P23946 247 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 ANXA13P27216 316 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 CX3CR1P49238 355 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 HSD17B7P56937 341 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 ZNF235Q14590 738 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 LINC01620Q4KN68 170 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 SPINT4Q6UDR6 99 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 CNTN4Q8IWV2 1026 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 ST20-AS1Q8NBB2 130 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 MINDY2Q8NBR6 621 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 OR4K14Q8NGD5 310 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 OR5L2Q8NGL0 311 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 ACOT11Q8WXI4 607 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 JAKMIP1Q96N16 626 aaKnown RBP0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 SLC6A7Q99884 636 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 POLR1EQ9GZS1 481 aaKnown RBP0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 YY1AP1Q9H869 796 aa0.56□□□□□ -2.32
RNU6-1009P-201ENST00000390996 IL26Q9NPH9 171 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms