RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 OTUD3Q5T2D3 398 aaPredicted RBP16.78■□□□□ 0.28
SMN2-202ENST00000380742 C1orf94Q6P1W5 598 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 SHQ1Q6PI26 577 aaKnown RBP16.78■□□□□ 0.28
SMN2-202ENST00000380742 B3GNT6Q6ZMB0 384 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 FCRLAQ7L513 359 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 MAMDC2Q7Z304 686 aaPredicted RBP16.78■□□□□ 0.28
SMN2-202ENST00000380742 CDK20Q8IZL9 346 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 PQLC1Q8N2U9 271 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 MARVELD2Q8N4S9 558 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 LINC00471Q8N535 108 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 C9orf106Q8NAJ2 232 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 OR10G2Q8NGC3 310 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 PRR7Q8TB68 274 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 RNF128Q8TEB7 428 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 GIPC3Q8TF64 312 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 TTYH2Q9BSA4 534 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 NAA11Q9BSU3 229 aaPredicted RBP16.78■□□□□ 0.28
SMN2-202ENST00000380742 ASPNQ9BXN1 380 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 PRRG4Q9BZD6 226 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 CHST11Q9NPF2 352 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 MRPL39Q9NYK5 338 aaKnown RBP16.78■□□□□ 0.28
SMN2-202ENST00000380742 PDP1Q9P0J1 537 aaPredicted RBP16.78■□□□□ 0.28
SMN2-202ENST00000380742 TMEM5Q9Y2B1 443 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 CORINQ9Y5Q5 1042 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 RELNP78509 3460 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 MBD3L4A6NDZ8 208 aaPredicted RBP16.77■□□□□ 0.28
SMN2-202ENST00000380742 MBD3L3A6NE82 208 aaPredicted RBP16.77■□□□□ 0.28
SMN2-202ENST00000380742 MBD3L5A6NJ08 208 aaPredicted RBP16.77■□□□□ 0.28
SMN2-202ENST00000380742 AQP7P3A6NL99 342 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 EFCAB9A8MZ26 197 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 H0YHG0 523 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 CYTIPO60759 359 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 TOXO94900 526 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 BAG2O95816 211 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 GASTP01350 101 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 GLI4P10075 376 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 SAGP10523 405 aaPredicted RBP16.77■□□□□ 0.28
SMN2-202ENST00000380742 PRKACGP22612 351 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 GTF2E2P29084 291 aaKnown RBP16.77■□□□□ 0.28
SMN2-202ENST00000380742 RCN1Q15293 331 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 MYO7BQ6PIF6 2116 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 NCCRP1Q6ZVX7 275 aaPredicted RBP16.77■□□□□ 0.28
SMN2-202ENST00000380742 H1FNTQ75WM6 255 aaPredicted RBP16.77■□□□□ 0.28
SMN2-202ENST00000380742 P4HA3Q7Z4N8 544 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 SCAIQ8N9R8 606 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 AQP11Q8NBQ7 271 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 OR5J2Q8NH18 312 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 OR5K1Q8NHB7 308 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 MBD3L2Q8NHZ7 208 aaPredicted RBP16.77■□□□□ 0.28
SMN2-202ENST00000380742 WNT2BQ93097 391 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 NRBF2Q96F24 287 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 RNF122Q9H9V4 155 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 B3GALT5Q9Y2C3 310 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 MEMO1Q9Y316 297 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 ZNF462Q96JM2 2506 aa16.77■□□□□ 0.28
SMN2-202ENST00000380742 RP1L1Q8IWN7 2480 aaPredicted RBP16.77■□□□□ 0.28
SMN2-202ENST00000380742 E9PLN8 166 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 MS4A18H0YCH9 400 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 IFNGR2P38484 337 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 GSSP48637 474 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 NUP107P57740 925 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 PMS2P3Q13401 168 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 FHL1Q13642 323 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 MS4A18Q3C1V0 323 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 ANKRD34AQ69YU3 496 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 ABLIM2Q6H8Q1 611 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 KDM8Q8N371 416 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 OR13C2Q8NGS9 318 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 GNPDA2Q8TDQ7 276 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 ABHD3Q8WU67 409 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 DMRTA2Q96SC8 542 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 FEVQ99581 238 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 VKORC1Q9BQB6 163 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 PSD2Q9BQI7 771 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 KRCC1Q9NPI7 259 aaPredicted RBP16.77■□□□□ 0.27
SMN2-202ENST00000380742 C6orf203Q9P0P8 240 aaPredicted RBP16.77■□□□□ 0.27
SMN2-202ENST00000380742 KLHL13Q9P2N7 655 aa16.77■□□□□ 0.27
SMN2-202ENST00000380742 ING1Q9UK53 422 aaPredicted RBP16.77■□□□□ 0.27
SMN2-202ENST00000380742 RRP15Q9Y3B9 282 aaKnown RBP16.77■□□□□ 0.27
SMN2-202ENST00000380742 ARRDC5A6NEK1 342 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 SAC3D1A6NKF1 404 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 ZNF716A6NP11 495 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 G3V2T6 193 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 PYCARD-AS1I3L0S3 204 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 CCL21O00585 134 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 PLPP3O14495 311 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 HPRP00739 348 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 HIST1H2ABP04908 130 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 TSPAN19P0C672 248 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 FCGR2AP12318 317 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 POU2F1P14859 743 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 ANPEPP15144 967 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 ZNF23P17027 643 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 SLC9A3P48764 834 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 ARHGDIAP52565 204 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 RASGEF1BQ0VAM2 473 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 PMPCAQ10713 525 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 HIST3H2AQ7L7L0 130 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 NANOGNBQ7Z5D8 188 aa16.76■□□□□ 0.27
SMN2-202ENST00000380742 ICA1LQ8NDH6 482 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms