RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 SGTBQ96EQ0 304 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 ZNF587Q96SQ5 575 aaPredicted RBP11.3□□□□□ -0.6
SMN1-202ENST00000380707 TM9SF2Q99805 663 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 NANSQ9NR45 359 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 KLHL13Q9P2N7 655 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 ING1Q9UK53 422 aaPredicted RBP11.3□□□□□ -0.6
SMN1-202ENST00000380707 TMCC3Q9ULS5 477 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 MYO7BQ6PIF6 2116 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 A0A0G2JNJ9 132 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 AQP7P3A6NL99 342 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 CDC42EP2O14613 210 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 CYTIPO60759 359 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 OR7A10O76100 309 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 RCBTB2O95199 551 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 MT-ATP6P00846 226 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 ASAH2BP0C7U1 165 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 FCGR2AP12318 317 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 GTF2E2P29084 291 aaKnown RBP11.3□□□□□ -0.6
SMN1-202ENST00000380707 CEACAM8P31997 349 aaPredicted RBP11.3□□□□□ -0.6
SMN1-202ENST00000380707 GPR4P46093 362 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 OMPP47874 163 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 MFSD13AQ14CX5 517 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 ATP6AP1Q15904 470 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 OTUD3Q5T2D3 398 aaPredicted RBP11.3□□□□□ -0.6
SMN1-202ENST00000380707 TMEM211Q6ICI0 200 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 ZFP1Q6P2D0 407 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 H1FNTQ75WM6 255 aaPredicted RBP11.3□□□□□ -0.6
SMN1-202ENST00000380707 ZER1Q7Z7L7 766 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 C10orf67Q8IYJ2 551 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 GCNT2Q8N0V5 402 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 KDM8Q8N371 416 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 LIPHQ8WWY8 451 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 INTS12Q96CB8 462 aaKnown RBP11.3□□□□□ -0.6
SMN1-202ENST00000380707 CCDC120Q96HB5 630 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 FAM46AQ96IP4 442 aaKnown RBP11.3□□□□□ -0.6
SMN1-202ENST00000380707 GPA33Q99795 319 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 NAA11Q9BSU3 229 aaPredicted RBP11.3□□□□□ -0.6
SMN1-202ENST00000380707 FKRPQ9H9S5 495 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 S100A14Q9HCY8 104 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 MRPL39Q9NYK5 338 aaKnown RBP11.3□□□□□ -0.6
SMN1-202ENST00000380707 Q9UFV3 132 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 ERRFI1Q9UJM3 462 aaPredicted RBP11.3□□□□□ -0.6
SMN1-202ENST00000380707 ZNF229Q9UJW7 825 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 CLEC4AQ9UMR7 237 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 CORINQ9Y5Q5 1042 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 PCNX1Q96RV3 2341 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 PHF3Q92576 2039 aaKnown RBP11.29□□□□□ -0.6
SMN1-202ENST00000380707 ARHGAP21Q5T5U3 1957 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 LRRK2Q5S007 2527 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 ZNF716A6NP11 495 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 MS4A18H0YCH9 400 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 J3QKU1 62 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 OR10H3O60404 316 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 DEAF1O75398 565 aaPredicted RBP11.29□□□□□ -0.6
SMN1-202ENST00000380707 LDLRP01130 860 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 IL2RAP01589 272 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 FASP25445 335 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 DNAJA1P31689 397 aaKnown RBP11.29□□□□□ -0.6
SMN1-202ENST00000380707 ADORA2A-AS1P86434 159 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 RASGEF1BQ0VAM2 473 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 FOXF2Q12947 444 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 RNPS1Q15287 305 aaKnown RBP11.29□□□□□ -0.6
SMN1-202ENST00000380707 MICAQ29983 383 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 MS4A18Q3C1V0 323 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 ABLIM2Q6H8Q1 611 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 ZNF770Q6IQ21 691 aaPredicted RBP11.29□□□□□ -0.6
SMN1-202ENST00000380707 HMBOX1Q6NT76 420 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 TMPRSS11FQ6ZWK6 438 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 MAMDC2Q7Z304 686 aaPredicted RBP11.29□□□□□ -0.6
SMN1-202ENST00000380707 AMIGO2Q86SJ2 522 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 MED12LQ86YW9 2145 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 SLC43A2Q8N370 569 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 SCAIQ8N9R8 606 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 OR9Q2Q8NGE9 314 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 OR5J2Q8NH18 312 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 PIGXQ8TBF5 258 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 ZNF775Q96BV0 537 aaPredicted RBP11.29□□□□□ -0.6
SMN1-202ENST00000380707 DOCK7Q96N67 2140 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 PSD2Q9BQI7 771 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 ASPNQ9BXN1 380 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 CHST11Q9NPF2 352 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 C6orf203Q9P0P8 240 aaPredicted RBP11.29□□□□□ -0.6
SMN1-202ENST00000380707 B3GALT5Q9Y2C3 310 aa11.29□□□□□ -0.6
SMN1-202ENST00000380707 HTR3EA5X5Y0 456 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 EFCAB9A8MZ26 197 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 PLPP3O14495 311 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 KLF4O43474 513 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 E2F6O75461 281 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 CCNB2O95067 398 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 HPRP00739 348 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 GASTP01350 101 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 SAGP10523 405 aaPredicted RBP11.28□□□□□ -0.6
SMN1-202ENST00000380707 FCGR1AP12314 374 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 PER3P56645 1201 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 PMS2P3Q13401 168 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 FHL1Q13642 323 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 SLC17A1Q14916 467 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 GUSBP1Q15486 140 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 RIPPLY2Q5TAB7 128 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 GTF2IRD2BQ6EKJ0 949 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms