RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ZNF674Q2M3X9 581 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 ZNF774Q6NX45 483 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 MED27Q6P2C8 311 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 FAHD2BQ6P2I3 314 aaPredicted RBP8.65□□□□□ -1.02
PTPRA-204ENST00000380393 ANKRD33Q7Z3H0 272 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 KCNRGQ8N5I3 272 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 KRTCAP2Q8N6L1 136 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 ZNF610Q8N9Z0 462 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 HJURPQ8NCD3 748 aaPredicted RBP8.65□□□□□ -1.02
PTPRA-204ENST00000380393 OR52I1Q8NGK6 324 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 NT5C3BQ969T7 300 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 FAHD2AQ96GK7 314 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 AKR1E2Q96JD6 320 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 HHIPL1Q96JK4 782 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 WDR92Q96MX6 357 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 LPAR2Q9HBW0 351 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 NT5MQ9NPB1 228 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 FBXO7Q9Y3I1 522 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 SMAD9O15198 467 aaKnown RBP8.65□□□□□ -1.03
PTPRA-204ENST00000380393 FGF16O43320 207 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 PRSS56P0CW18 603 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 MTHFD2P13995 350 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 AQP1P29972 269 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 SOX18P35713 384 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 RPL29P47914 159 aaKnown RBP8.65□□□□□ -1.03
PTPRA-204ENST00000380393 HTR6P50406 440 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 ZP2Q05996 745 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 SLC14A1Q13336 389 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 GGNBP1Q5YKI7 109 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 CD200R1LQ6Q8B3 271 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 UNQ6126/PRO20091Q6UXV3 157 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 APOOLQ6UXV4 268 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 SLC39A5Q6ZMH5 540 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 SLC24A5Q71RS6 500 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 WDR53Q7Z5U6 358 aaPredicted RBP8.65□□□□□ -1.03
PTPRA-204ENST00000380393 HS6ST3Q8IZP7 471 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 TCEANCQ8N8B7 351 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 OR2AK2Q8NG84 335 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 PPTC7Q8NI37 304 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 SULT4A1Q9BR01 284 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 SEMA5BQ9P283 1151 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 CACFD1Q9UGQ2 172 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 IL20RAQ9UHF4 553 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 CBLCQ9ULV8 474 aa8.65□□□□□ -1.03
PTPRA-204ENST00000380393 TIMM13Q9Y5L4 95 aaPredicted RBP8.65□□□□□ -1.03
PTPRA-204ENST00000380393 TRBV5-3A0A0A0MS03 114 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 C9J4A7 227 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 TSPAN2O60636 221 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 VAMP5O95183 116 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 CD1DP15813 335 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 TBPP20226 339 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 TNFRSF1BP20333 461 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 CD80P33681 288 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 KIR3DL1P43629 444 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 MECP2P51608 486 aaKnown RBP8.64□□□□□ -1.03
PTPRA-204ENST00000380393 VEZF1Q14119 521 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 TEAD2Q15562 447 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 KCTD9Q7L273 389 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 NR2C2APQ86WQ0 139 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF671Q8TAW3 534 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 RCC1LQ96I51 464 aaKnown RBP8.64□□□□□ -1.03
PTPRA-204ENST00000380393 KLHL5Q96PQ7 755 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 ADGRE3Q9BY15 652 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF350Q9GZX5 532 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 SLITRK2Q9H156 845 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 FTSJ1Q9UET6 329 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF346Q9UL40 294 aaKnown RBP8.64□□□□□ -1.03
PTPRA-204ENST00000380393 LRRC37A2A6NM11 1700 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 CLIC1O00299 241 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 PEX12O00623 359 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 AGPAT2O15120 278 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 SCN2BO60939 215 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 AHSA1O95433 338 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 GEMP55040 296 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 NRG3P56975 720 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 REEP5Q00765 189 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 UBE3DQ7Z6J8 389 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF467Q7Z7K2 595 aaPredicted RBP8.64□□□□□ -1.03
PTPRA-204ENST00000380393 CACUL1Q86Y37 369 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 AQP11Q8NBQ7 271 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 RNF141Q8WVD5 230 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 MR1Q95460 341 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 MRGPRX3Q96LB0 322 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 INSM2Q96T92 566 aaPredicted RBP8.64□□□□□ -1.03
PTPRA-204ENST00000380393 COPS8Q99627 209 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF426Q9BUY5 554 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 UBQLN4Q9NRR5 601 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 POT1Q9NUX5 634 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 CACNG4Q9UBN1 327 aa8.64□□□□□ -1.03
PTPRA-204ENST00000380393 TRIP12Q14669 1992 aaPredicted RBP8.64□□□□□ -1.03
PTPRA-204ENST00000380393 C20orf202A1L168 122 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 TMEM235A6NFC5 223 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 IDSB3KWA1 339 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 SOX14O95416 240 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 IL5P05113 134 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 HLA-DQB2P05538 268 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 IRS1P35568 1242 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 MTNR1BP49286 362 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 SULT1A1P50225 295 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 NOVA1P51513 510 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms