RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SHQ1Q6PI26 577 aaKnown RBP15.39■□□□□ 0.05
PDLIM4-202ENST00000379018 GLCCI1Q86VQ1 547 aa15.39■□□□□ 0.05
PDLIM4-202ENST00000379018 ZNF786Q8N393 782 aa15.39■□□□□ 0.05
PDLIM4-202ENST00000379018 C3orf56Q8N813 242 aa15.39■□□□□ 0.05
PDLIM4-202ENST00000379018 OIT3Q8WWZ8 545 aa15.39■□□□□ 0.05
PDLIM4-202ENST00000379018 ARPC4-TTLL3A0A0A6YYG9 625 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 SEC14L2O76054 403 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 TCN1P20061 433 aaPredicted RBP15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 PCMT1P22061 227 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 DVL1P1P54792 670 aaPredicted RBP15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 SNTB2Q13425 540 aaKnown RBP15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 ANXA8L1Q5VT79 327 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 CREB3L2Q70SY1 520 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 CMIPQ8IY22 773 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 KDM8Q8N371 416 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 VPS37AQ8NEZ2 397 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 NUP37Q8NFH4 326 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 SEMA6DQ8NFY4 1073 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 OR8J2Q8NGG1 315 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 PNPT1Q8TCS8 783 aaKnown RBP15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 NEURL3Q96EH8 262 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 ANKRD27Q96NW4 1050 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 DOK1Q99704 481 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 SLC38A1Q9H2H9 487 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 NELFAQ9H3P2 528 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 RLIMQ9NVW2 624 aa15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 CRNNQ9UBG3 495 aaPredicted RBP15.38■□□□□ 0.05
PDLIM4-202ENST00000379018 IGHV2OR16-5A0A0B4J2B6 119 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 PRSS51A0A1B0GVH4 220 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 AGAP5A6NIR3 686 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 KCNAB3O43448 404 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 FRS3O43559 492 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 IGLV1-44P01699 117 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 GUSBP08236 651 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 NR2F1P10589 423 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 NME5P56597 212 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 CLDN17P56750 224 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 ARF1P84077 181 aaKnown RBP15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 RIN1Q13671 783 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 GNA13Q14344 377 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 SPANXN4Q5MJ08 99 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 TCP10LQ8TDR4 215 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 GCDHQ92947 438 aaPredicted RBP15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 SLC25A36Q96CQ1 311 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 ZNF442Q9H7R0 627 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 PPCSQ9HAB8 311 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 CRLF2Q9HC73 371 aa15.37■□□□□ 0.05
PDLIM4-202ENST00000379018 TMEM129A0AVI4 362 aa15.36■□□□□ 0.05
PDLIM4-202ENST00000379018 B4DSR2 109 aa15.36■□□□□ 0.05
PDLIM4-202ENST00000379018 P2RY4P51582 365 aa15.36■□□□□ 0.05
PDLIM4-202ENST00000379018 DAG1Q14118 895 aa15.36■□□□□ 0.05
PDLIM4-202ENST00000379018 C1orf140Q5VVS0 124 aa15.36■□□□□ 0.05
PDLIM4-202ENST00000379018 ATG16L1Q676U5 607 aa15.36■□□□□ 0.05
PDLIM4-202ENST00000379018 CARM1Q86X55 608 aa15.36■□□□□ 0.05
PDLIM4-202ENST00000379018 EPHX4Q8IUS5 362 aa15.36■□□□□ 0.05
PDLIM4-202ENST00000379018 TRNT1Q96Q11 434 aaKnown RBP15.36■□□□□ 0.05
PDLIM4-202ENST00000379018 AKTIPQ9H8T0 292 aa15.36■□□□□ 0.05
PDLIM4-202ENST00000379018 HIF1ANQ9NWT6 349 aa15.36■□□□□ 0.05
PDLIM4-202ENST00000379018 MKS1Q9NXB0 559 aa15.36■□□□□ 0.05
PDLIM4-202ENST00000379018 ASIC5Q9NY37 505 aa15.36■□□□□ 0.05
PDLIM4-202ENST00000379018 FBXO9Q9UK97 447 aaPredicted RBP15.36■□□□□ 0.05
PDLIM4-202ENST00000379018 ZNF503-AS2A6NEH8 195 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 FAM157AC9JC47 383 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 IGKV3-15P01624 115 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 IGFBP1P08833 259 aaPredicted RBP15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 CBR1P16152 277 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 EGR1P18146 543 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 NCF2P19878 526 aaPredicted RBP15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 GPR6P46095 362 aaPredicted RBP15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 MAP2K6P52564 334 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 COPZ1P61923 177 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 ZNF836Q6ZNA1 936 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 LRRC74BQ6ZQY2 392 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 MDP1Q86V88 176 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 VRK2Q86Y07 508 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 CLDND2Q8NHS1 167 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 KIF18AQ8NI77 898 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 ZNF418Q8TF45 676 aaPredicted RBP15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 TMEM186Q96B77 213 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 BOD1Q96IK1 185 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 NOX3Q9HBY0 568 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 GRIP1Q9Y3R0 1128 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 CMAHPQ9Y471 501 aa15.35■□□□□ 0.05
PDLIM4-202ENST00000379018 A8MVM7 634 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 FAAHO00519 579 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 GSNP06396 782 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 DBIP07108 87 aaKnown RBP15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 SAGP10523 405 aaPredicted RBP15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 RPS4Y1P22090 263 aaKnown RBP15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 PAX7P23759 505 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 GTF2E2P29084 291 aaKnown RBP15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 S100A3P33764 101 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 SERPINB5P36952 375 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 SH3BGRP55822 239 aaPredicted RBP15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 CASP8Q14790 479 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 CEACAM16Q2WEN9 425 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 C3orf36Q3SXR2 165 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 COX20Q5RI15 118 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 AP1ARQ63HQ0 302 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 WBP2NLQ6ICG8 309 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms