RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 LYZL6O75951 148 aa16.68■□□□□ 0.26
TMEM88B-201ENST00000378821 PRDX6P30041 224 aa16.68■□□□□ 0.26
TMEM88B-201ENST00000378821 RGS8P57771 180 aaPredicted RBP16.68■□□□□ 0.26
TMEM88B-201ENST00000378821 DUSP7Q16829 419 aa16.68■□□□□ 0.26
TMEM88B-201ENST00000378821 INTS11Q5TA45 600 aaKnown RBP16.68■□□□□ 0.26
TMEM88B-201ENST00000378821 HACD2Q6Y1H2 254 aa16.68■□□□□ 0.26
TMEM88B-201ENST00000378821 CCDC80Q76M96 950 aa16.68■□□□□ 0.26
TMEM88B-201ENST00000378821 ARPINQ7Z6K5 226 aa16.68■□□□□ 0.26
TMEM88B-201ENST00000378821 CMTM5Q96DZ9 223 aa16.68■□□□□ 0.26
TMEM88B-201ENST00000378821 CCT8L2Q96SF2 557 aa16.68■□□□□ 0.26
TMEM88B-201ENST00000378821 PRR14Q9BWN1 585 aa16.68■□□□□ 0.26
TMEM88B-201ENST00000378821 TRIM2Q9C040 744 aa16.68■□□□□ 0.26
TMEM88B-201ENST00000378821 EFCAB1Q9HAE3 211 aa16.68■□□□□ 0.26
TMEM88B-201ENST00000378821 OR5H1A6NKK0 313 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 M0R3H8 397 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 LY6G6DO95868 133 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 CD247P20963 164 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 CXCR1P25024 350 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 BSPH1Q075Z2 132 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 BNIP2Q12982 314 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 PPA1Q15181 289 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 ZNF672Q499Z4 452 aaPredicted RBP16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 ERICH5Q6P6B1 374 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 ATG4DQ86TL0 474 aaPredicted RBP16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 SLC15A3Q8IY34 581 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 ZNF100Q8IYN0 542 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 FBXW5Q969U6 566 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 DDIT4LQ96D03 193 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 ARHGDIGQ99819 225 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 GRIP2Q9C0E4 1043 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 MALT1Q9UDY8 824 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 TESQ9UGI8 421 aaKnown RBP16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 SLC13A4Q9UKG4 626 aa16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 NOSIPQ9Y314 301 aaKnown RBP16.67■□□□□ 0.26
TMEM88B-201ENST00000378821 A0A1B0GWA3 101 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 TRIM64A6NGJ6 449 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 TRIM64BA6NI03 449 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 TMEM229AB2RXF0 380 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 PDLIM1O00151 329 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 NME4O00746 187 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 TPST2O60704 377 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 EIF1BO60739 113 aaKnown RBP16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 RAMP1O60894 148 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 SHOX2O60902 331 aaPredicted RBP16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 LGI1O95970 557 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 SOD3P08294 240 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 IMPDH2P12268 514 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 GGT1P19440 569 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 SLC7A2P52569 658 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 RPS4XP62701 263 aaKnown RBP16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 SLC35A1P78382 337 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 VEZF1Q14119 521 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 NRF1Q16656 503 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 CCDC103Q8IW40 242 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 MICU2Q8IYU8 434 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 OR2T12Q8NG77 320 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 OR52E4Q8NGH9 312 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 APH1AQ96BI3 265 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 LAMP3Q9UQV4 416 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 NAV3Q8IVL0 2385 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 CADP27708 2225 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 USF3Q68DE3 2245 aa16.66■□□□□ 0.26
TMEM88B-201ENST00000378821 SHISA9B4DS77 424 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 DCTN3O75935 186 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 FAM107AO95990 144 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 OR2B6P58173 313 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 NCALDP61601 193 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 SLC17A1Q14916 467 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 NPTX1Q15818 432 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 PGGHGQ32M88 737 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 PAQR6Q6TCH4 344 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 C6orf89Q6UWU4 347 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 LSMEM1Q8N8F7 131 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 OR4D11Q8NGI4 311 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 SMAP2Q8WU79 429 aaPredicted RBP16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 NEUROG1Q92886 237 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 MUCL1Q96DR8 90 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 MUS81Q96NY9 551 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 LRRC37BQ96QE4 947 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 HOPXQ9BPY8 73 aaPredicted RBP16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 AMBRA1Q9C0C7 1298 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 EVA1AQ9H8M9 152 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 NPAP1Q9NZP6 1156 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 RPS6KB2Q9UBS0 482 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 AP3M1Q9Y2T2 418 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 FLVCR1Q9Y5Y0 555 aa16.65■□□□□ 0.26
TMEM88B-201ENST00000378821 FN1P02751 2386 aaKnown RBP16.64■□□□□ 0.25
TMEM88B-201ENST00000378821 CLOCKO15516 846 aa16.64■□□□□ 0.25
TMEM88B-201ENST00000378821 MRPL33O75394 65 aaKnown RBP16.64■□□□□ 0.25
TMEM88B-201ENST00000378821 C8BP07358 591 aa16.64■□□□□ 0.25
TMEM88B-201ENST00000378821 ATP5J2P56134 94 aa16.64■□□□□ 0.25
TMEM88B-201ENST00000378821 LIPEQ05469 1076 aa16.64■□□□□ 0.25
TMEM88B-201ENST00000378821 ETFDHQ16134 617 aa16.64■□□□□ 0.25
TMEM88B-201ENST00000378821 C1QTNF12Q5T7M4 302 aa16.64■□□□□ 0.25
TMEM88B-201ENST00000378821 FAM91A1Q658Y4 838 aa16.64■□□□□ 0.25
TMEM88B-201ENST00000378821 ALKBH2Q6NS38 261 aa16.64■□□□□ 0.25
TMEM88B-201ENST00000378821 Q71RC1 249 aaPredicted RBP16.64■□□□□ 0.25
TMEM88B-201ENST00000378821 RANBP3LQ86VV4 465 aaPredicted RBP16.64■□□□□ 0.25
TMEM88B-201ENST00000378821 ANKS4BQ8N8V4 417 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms