RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 C21orf58P58505 322 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 SQSTM1Q13501 440 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 FGFBP1Q14512 234 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 GAB4Q2WGN9 574 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 FSCN3Q9NQT6 498 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 TMEFF2Q9UIK5 374 aaPredicted RBP13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 SLC6A5Q9Y345 797 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 TRAV36DV7A0A075B6V5 113 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 A0A1W2PQ09 198 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 SMLR1H3BR10 107 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 TEX46H3BTG2 121 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 ACOT7O00154 380 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 EEF1E1O43324 174 aaKnown RBP13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 SLC19A2O60779 497 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 OR8G3PP0DMU2 310 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 DPP4P27487 766 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 LIPAP38571 399 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 CAV3P56539 151 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 CTBP2P56545 445 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 SNRPGP62308 76 aaKnown RBP13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 SYT6Q5T7P8 510 aaPredicted RBP13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 ZNF620Q6ZNG0 422 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 OR4C3Q8NH37 302 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 DPCDQ9BVM2 203 aaPredicted RBP13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 GABARAPL3Q9BY60 117 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 CIB4A0PJX0 185 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 LRRN3E7EW58 273 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 INMT-MINDY4F8WBC2 141 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 GRK5P34947 590 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 EEF1A1P68104 462 aaKnown RBP13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 ARG2P78540 354 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 MAB21L1Q13394 359 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 DPY19L4Q7Z388 723 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 OR5H6Q8NGV6 325 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 OR1L3Q8NH93 324 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 NOX1Q9Y5S8 564 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 CDHR4A6H8M9 788 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 SEC14L2O76054 403 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 MAKP20794 623 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 EPHA8P29322 1005 aaPredicted RBP13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 DEFA5Q01523 94 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 OXA1LQ15070 435 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 AGAP6Q5VW22 663 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 SLC22A10Q63ZE4 541 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 OR7E24Q6IFN5 339 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 LINC00696Q6ZRV3 163 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 SLC35D2Q76EJ3 337 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 SLC46A3Q7Z3Q1 461 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 C1orf210Q8IVY1 113 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 OR52I1Q8NGK6 324 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 GPR148Q8TDV2 347 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 AGAP4Q96P64 663 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 SMOC1Q9H4F8 434 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 CHMP1AQ9HD42 196 aaPredicted RBP13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 HINT3Q9NQE9 182 aaKnown RBP13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 DIMT1Q9UNQ2 313 aaKnown RBP13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 PDCD11Q14690 1871 aaKnown RBP13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 A8MVM7 634 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 EIF4E2O60573 245 aaKnown RBP13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 HTR1FP30939 366 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 TMEM69Q5SWH9 247 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 HES5Q5TA89 166 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 MTFR2Q6P444 385 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 FAM26EQ8N5C1 309 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 OR1J4Q8NGS1 313 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 DEDD2Q8WXF8 326 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 ACOT12Q8WYK0 555 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 RFT1Q96AA3 541 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 RASD2Q96D21 266 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 ABCG5Q9H222 651 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 FN3KQ9H479 309 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 FBXO9Q9UK97 447 aaPredicted RBP13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 CACNA1GO43497 2377 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 GREB1Q4ZG55 1949 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 PRAMEF25A6NGN4 478 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 ZNF432O94892 652 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 GMFBP60983 142 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 UBE2IP63279 158 aaKnown RBP13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 ATAD3CQ5T2N8 411 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 FAM69AQ5T7M9 428 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 MRM1Q6IN84 353 aaKnown RBP13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 DPY19L2P2Q6ZN68 376 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 AKAP1Q92667 903 aaKnown RBP eCLIP13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 FYTTD1Q96QD9 318 aaKnown RBP13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 GINS4Q9BRT9 223 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 DPAGT1Q9H3H5 408 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 INPP5EQ9NRR6 644 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 MEIOCA2RUB1 952 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 ICOSLGO75144 302 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 UCHL1P09936 223 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 MPEG1Q2M385 716 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 GLYR1Q49A26 553 aaPredicted RBP13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 AGAP7PQ5VUJ5 663 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 FAM180AQ6UWF9 173 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 CPEB2Q7Z5Q1 589 aaKnown RBP13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 A4GNTQ9UNA3 340 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 ADAM18Q9Y3Q7 739 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 PCDHGB2Q9Y5G2 931 aa13.03□□□□□ -0.32
SHROOM1-203ENST00000378679 F5H5K5 113 aa13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 SLC2A10O95528 541 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms