RNA–Protein interactions for RNA: ENST00000378538.7

SPI1-202, Transcript of Spi-1 proto-oncogene, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPI1, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPI1-202ENST00000378538 USF1P22415 310 aaPredicted RBP18.59■□□□□ 0.57
SPI1-202ENST00000378538 CRISP3P54108 245 aa18.59■□□□□ 0.57
SPI1-202ENST00000378538 DSTNP60981 165 aa18.59■□□□□ 0.57
SPI1-202ENST00000378538 COPZ1P61923 177 aa18.59■□□□□ 0.57
SPI1-202ENST00000378538 TBRG1Q3YBR2 411 aa18.59■□□□□ 0.57
SPI1-202ENST00000378538 SLC9B1Q4ZJI4 515 aa18.59■□□□□ 0.57
SPI1-202ENST00000378538 PDCD4Q53EL6 469 aaKnown RBP18.59■□□□□ 0.57
SPI1-202ENST00000378538 C1orf140Q5VVS0 124 aa18.59■□□□□ 0.57
SPI1-202ENST00000378538 CYB5R2Q6BCY4 276 aa18.59■□□□□ 0.57
SPI1-202ENST00000378538 NXNQ6DKJ4 435 aa18.59■□□□□ 0.57
SPI1-202ENST00000378538 KLHL24Q6TFL4 600 aa18.59■□□□□ 0.57
SPI1-202ENST00000378538 EPHX4Q8IUS5 362 aa18.59■□□□□ 0.57
SPI1-202ENST00000378538 BCL2L2Q92843 193 aaPredicted RBP18.59■□□□□ 0.57
SPI1-202ENST00000378538 CALML5Q9NZT1 146 aa18.59■□□□□ 0.57
SPI1-202ENST00000378538 CDC42EP3Q9UKI2 254 aa18.59■□□□□ 0.57
SPI1-202ENST00000378538 NR5A2O00482 541 aa18.58■□□□□ 0.57
SPI1-202ENST00000378538 UPK3AO75631 287 aa18.58■□□□□ 0.57
SPI1-202ENST00000378538 SASH3O75995 380 aa18.58■□□□□ 0.57
SPI1-202ENST00000378538 KRT33AO76009 404 aa18.58■□□□□ 0.57
SPI1-202ENST00000378538 RNF220Q5VTB9 566 aa18.58■□□□□ 0.57
SPI1-202ENST00000378538 ABHD12BQ7Z5M8 362 aaPredicted RBP18.58■□□□□ 0.57
SPI1-202ENST00000378538 SERPINA11Q86U17 422 aa18.58■□□□□ 0.57
SPI1-202ENST00000378538 KDM8Q8N371 416 aa18.58■□□□□ 0.57
SPI1-202ENST00000378538 VPS33AQ96AX1 596 aa18.58■□□□□ 0.57
SPI1-202ENST00000378538 C3orf49Q96BT1 292 aa18.58■□□□□ 0.57
SPI1-202ENST00000378538 TMEM19Q96HH6 336 aa18.58■□□□□ 0.57
SPI1-202ENST00000378538 MAELQ96JY0 434 aaKnown RBP18.58■□□□□ 0.57
SPI1-202ENST00000378538 SORCS2Q96PQ0 1159 aa18.58■□□□□ 0.57
SPI1-202ENST00000378538 ZNF446Q9NWS9 450 aa18.58■□□□□ 0.57
SPI1-202ENST00000378538 TMEM160Q9NX00 188 aa18.58■□□□□ 0.57
SPI1-202ENST00000378538 VWC2LB2RUY7 222 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 TMEM229AB2RXF0 380 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 VAMP5O95183 116 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 ANP32DO95626 131 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 CSF3P09919 207 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 IDO1P14902 403 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 NCF2P19878 526 aaPredicted RBP18.57■□□□□ 0.56
SPI1-202ENST00000378538 LSM11P83369 360 aaKnown RBP eCLIP18.57■□□□□ 0.56
SPI1-202ENST00000378538 LARS2Q15031 903 aaKnown RBP18.57■□□□□ 0.56
SPI1-202ENST00000378538 MAVSQ7Z434 540 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 ARIH2OSQ8N7S6 290 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 TMEM158Q8WZ71 300 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 ALKBH3Q96Q83 286 aaPredicted RBP18.57■□□□□ 0.56
SPI1-202ENST00000378538 SLC38A2Q96QD8 506 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 SPATA9Q9BWV2 254 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 RSPO3Q9BXY4 272 aaPredicted RBP18.57■□□□□ 0.56
SPI1-202ENST00000378538 BEX2Q9BXY8 128 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 OBP2BQ9NPH6 170 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 ZNF232Q9UNY5 417 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 A0A0G2JPF8 293 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 HNRNPCL2B2RXH8 293 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 HNRNPCL3B7ZW38 293 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 FTCDNL1E5RQL4 147 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 ZNF587BE7ETH6 402 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 PHF1O43189 567 aaPredicted RBP18.57■□□□□ 0.56
SPI1-202ENST00000378538 HNRNPCL1O60812 293 aaKnown RBP18.57■□□□□ 0.56
SPI1-202ENST00000378538 HNRNPCL4P0DMR1 293 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 ZNF16P17020 682 aaPredicted RBP18.57■□□□□ 0.56
SPI1-202ENST00000378538 TUBA1BP68363 451 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 TUBA4AP68366 448 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 HOXC5Q00444 222 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 EGR4Q05215 589 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 PRAMEF8Q5VWM4 474 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 PRAMEF7Q5VXH5 474 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 NIPAL3Q6P499 406 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 ANKRD16Q6P6B7 361 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 TUBA1AQ71U36 451 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 MGARPQ8TDB4 240 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 STK35Q8TDR2 534 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 NELFAQ9H3P2 528 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 CA10Q9NS85 328 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 RASD1Q9Y272 281 aa18.57■□□□□ 0.56
SPI1-202ENST00000378538 A0A096LPE4 126 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 A0A1W2PPZ6 126 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 TMEM120BA0PK00 339 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 NUDT7P0C024 238 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 SERPINF1P36955 418 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 PDLIM4P50479 330 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 ANKS4BQ8N8V4 417 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 OR9I1Q8NGQ6 314 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 MFSD8Q8NHS3 518 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 SLC25A36Q96CQ1 311 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 ITCHQ96J02 903 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 OR52B2Q96RD2 323 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 KATNB1Q9BVA0 655 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 PTDSS2Q9BVG9 487 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 SEC61A2Q9H9S3 476 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 SDR39U1Q9NRG7 319 aaPredicted RBP18.56■□□□□ 0.56
SPI1-202ENST00000378538 ZIM2Q9NZV7 527 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 CRNNQ9UBG3 495 aaPredicted RBP18.56■□□□□ 0.56
SPI1-202ENST00000378538 SEC14L4Q9UDX3 406 aa18.56■□□□□ 0.56
SPI1-202ENST00000378538 SLCO1B7G3V0H7 640 aa18.55■□□□□ 0.56
SPI1-202ENST00000378538 PNMTP11086 282 aa18.55■□□□□ 0.56
SPI1-202ENST00000378538 CALCRP30988 508 aa18.55■□□□□ 0.56
SPI1-202ENST00000378538 RPS5P46782 204 aaKnown RBP18.55■□□□□ 0.56
SPI1-202ENST00000378538 POLR2JP52435 117 aaKnown RBP18.55■□□□□ 0.56
SPI1-202ENST00000378538 ZSWIM7Q19AV6 140 aa18.55■□□□□ 0.56
SPI1-202ENST00000378538 AGBL2Q5U5Z8 902 aa18.55■□□□□ 0.56
SPI1-202ENST00000378538 ATG16L1Q676U5 607 aa18.55■□□□□ 0.56
SPI1-202ENST00000378538 MAGEE2Q8TD90 523 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms