RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 ITGB7P26010 798 aa11.15□□□□□ -0.63
PCDHA9-201ENST00000378122 GDNFP39905 211 aa11.15□□□□□ -0.63
PCDHA9-201ENST00000378122 GPR155Q7Z3F1 870 aa11.15□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC35F3Q8IY50 421 aa11.15□□□□□ -0.63
PCDHA9-201ENST00000378122 ELOVL3Q9HB03 270 aa11.15□□□□□ -0.63
PCDHA9-201ENST00000378122 KDM4EB2RXH2 506 aaPredicted RBP11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 PRRG2O14669 202 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 CCR6P51684 374 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 GPR18Q14330 331 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 KCTD11Q693B1 232 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 MRPL41Q8IXM3 137 aaKnown RBP11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 CMTM1Q8IZ96 169 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 CADM3Q8N126 398 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 IL1F10Q8WWZ1 152 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 BTBD2Q9BX70 525 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 C20orf85Q9H1P6 137 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 CBLCQ9ULV8 474 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 HAX1O00165 279 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 TNFRSF10AO00220 468 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC16A7O60669 478 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 FBXO24O75426 580 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 SHC1P29353 583 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 XCR1P46094 333 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 PRLHRP49683 370 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 GABREP78334 506 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC6A19Q695T7 634 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 SULF2Q8IWU5 870 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 BPIFB2Q8N4F0 458 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 OR10K1Q8NGX5 313 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC35B4Q969S0 331 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 ZNF583Q96ND8 569 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 SNX18Q96RF0 628 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 NIPSNAP1Q9BPW8 284 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 OBP2BQ9NPH6 170 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 CRYBG1Q9Y4K1 1723 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 METTL15A6NJ78 407 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 VASPP50552 380 aaPredicted RBP11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 ZNF169Q14929 603 aaPredicted RBP11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC22A6Q4U2R8 563 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 PRAMEF20Q5VT98 475 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 PLCXD3Q63HM9 321 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 COX15Q7KZN9 410 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 SCCPDHQ8NBX0 429 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 OR56B4Q8NH76 319 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 TXNDC15Q96J42 360 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 ZNF416Q9BWM5 594 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 B3GNT2Q9NY97 397 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC35A3Q9Y2D2 325 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 SNX11Q9Y5W9 270 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 A0A1B0GUL6 1792 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 A0A1W2PS29 197 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 F13BP05160 661 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 DDOSTP39656 456 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 PDE7AQ13946 482 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 ABHD12BQ7Z5M8 362 aaPredicted RBP11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 ZNF454Q8N9F8 522 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 LGALS14Q8TCE9 139 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 ST7LQ8TDW4 575 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 TRMT2BQ96GJ1 504 aaKnown RBP11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 MED30Q96HR3 178 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 EMC7Q9NPA0 242 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 C19orf12Q9NSK7 152 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 EHFQ9NZC4 300 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 SCML1Q9UN30 329 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 CDHR4A6H8M9 788 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 GJE1A6NN92 205 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 SCGB1D1O95968 90 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 OR1D4P47884 311 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 SRP9P49458 86 aaKnown RBP11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 VEGFCP49767 419 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 TRA2BP62995 288 aaKnown RBP11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 DEFA6Q01524 100 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 MRPL2Q5T653 305 aaKnown RBP11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 HCAR1Q9BXC0 346 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 WASH6PQ9NQA3 447 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 ACOD1A6NK06 481 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 H7C1C5 153 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 STK17BO94768 372 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 AIFM1O95831 613 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 OR1D5P58170 312 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 LCN6P62502 163 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 RBMS2Q15434 407 aaKnown RBP11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 SMAP2Q8WU79 429 aaPredicted RBP11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 ISL2Q96A47 359 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 SEMA4GQ9NTN9 838 aa11.14□□□□□ -0.63
PCDHA9-201ENST00000378122 OR2A25A4D2G3 310 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 NPC1O15118 1278 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC43A1O75387 559 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 PRKRAO75569 313 aaKnown RBP11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 AGFG2O95081 481 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 CLEC2LP0C7M8 214 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 IRS1P35568 1242 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 DUSP7Q16829 419 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 MARCH8Q5T0T0 291 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 SIAH3Q8IW03 269 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 MIB2Q96AX9 1013 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 PIGBOS1A0A0B4J2F0 54 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 CD300LBA8K4G0 201 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 TAPBPO15533 448 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 P2RX6O15547 441 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms