RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 FAM86B1Q8N7N1 296 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 TMEM239Q8WW34 195 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 LRGUKQ96M69 825 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 ASPNQ9BXN1 380 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 CADM1Q9BY67 442 aaKnown RBP11.78□□□□□ -0.52
CKAP2-202ENST00000378034 MAGIXQ9H6Y5 334 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 IL1RAPQ9NPH3 570 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 FANCFQ9NPI8 374 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 ZNF814B7Z6K7 855 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 ACOT8O14734 319 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 FFAR1O14842 300 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 SMNDC1O75940 238 aaKnown RBP eCLIP11.78□□□□□ -0.52
CKAP2-202ENST00000378034 MT-ND1P03886 318 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 HOXB6P17509 224 aaKnown RBP11.78□□□□□ -0.52
CKAP2-202ENST00000378034 GRPRP30550 384 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 YAP1P46937 504 aaKnown RBP11.78□□□□□ -0.52
CKAP2-202ENST00000378034 P2RY4P51582 365 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 POU4F3Q15319 338 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 CCDC121Q6ZUS5 278 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 H1FNTQ75WM6 255 aaPredicted RBP11.78□□□□□ -0.52
CKAP2-202ENST00000378034 TSEN54Q7Z6J9 526 aaKnown RBP11.78□□□□□ -0.52
CKAP2-202ENST00000378034 P3H2Q8IVL5 708 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 RNF113BQ8IZP6 322 aaKnown RBP11.78□□□□□ -0.52
CKAP2-202ENST00000378034 PIK3C3Q8NEB9 887 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 CCDC124Q96CT7 223 aaKnown RBP11.78□□□□□ -0.52
CKAP2-202ENST00000378034 LRMDAQ9H2I8 198 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 FKRPQ9H9S5 495 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 MRPL39Q9NYK5 338 aaKnown RBP11.78□□□□□ -0.52
CKAP2-202ENST00000378034 ELOVL5Q9NYP7 299 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 C6orf203Q9P0P8 240 aaPredicted RBP11.78□□□□□ -0.52
CKAP2-202ENST00000378034 MED31Q9Y3C7 131 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 LOC102725191A0A1B0GVB3 256 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 TCRBV5S2A0A599 114 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 AQP12BA6NM10 295 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 J3KTA2 159 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 FABP3P05413 133 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 SMIM11AP58511 58 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 VLDLRP98155 873 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 LTBQ06643 244 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 ZNF74Q16587 644 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 IQCCQ4KMZ1 466 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 PIWIL3Q7Z3Z3 882 aaKnown RBP11.77□□□□□ -0.53
CKAP2-202ENST00000378034 KIF18BQ86Y91 864 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 AQP12AQ8IXF9 295 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 C10orf53Q8N6V4 93 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 ACBD4Q8NC06 268 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 OR9K2Q8NGE7 335 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 TMEM255BQ8WV15 326 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 ZNF347Q96SE7 839 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 PIP5K1AQ99755 562 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 RBM24Q9BX46 236 aaKnown RBP11.77□□□□□ -0.53
CKAP2-202ENST00000378034 NMNAT1Q9HAN9 279 aaPredicted RBP11.77□□□□□ -0.53
CKAP2-202ENST00000378034 SLC24A3Q9HC58 644 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 MEPEQ9NQ76 525 aaPredicted RBP11.77□□□□□ -0.53
CKAP2-202ENST00000378034 MAN2C1Q9NTJ4 1040 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 PARPBPQ9NWS1 579 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 ZNF229Q9UJW7 825 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 FLVCR1Q9Y5Y0 555 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 V9GYQ6 96 aa11.77□□□□□ -0.53
CKAP2-202ENST00000378034 A0A1W2PRQ8 180 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 hCG_2039718K7EN88 272 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 M0R082 166 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 RAMP1O60894 148 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 CNOT4O95628 575 aaKnown RBP11.76□□□□□ -0.53
CKAP2-202ENST00000378034 H1F0P07305 194 aaKnown RBP11.76□□□□□ -0.53
CKAP2-202ENST00000378034 UGT2B15P54855 530 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 DGCR6Q14129 220 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 SP5Q6BEB4 398 aaPredicted RBP11.76□□□□□ -0.53
CKAP2-202ENST00000378034 BEND4Q6ZU67 534 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 NUFIP2Q7Z417 695 aaKnown RBP11.76□□□□□ -0.53
CKAP2-202ENST00000378034 LUZP2Q86TE4 346 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 ZNF610Q8N9Z0 462 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 ZNF417Q8TAU3 575 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 LIPHQ8WWY8 451 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 ACOT11Q8WXI4 607 aaPredicted RBP11.76□□□□□ -0.53
CKAP2-202ENST00000378034 TMEM45BQ96B21 275 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 OXGR1Q96P68 337 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 MOGAT1Q96PD6 335 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 ZNF587Q96SQ5 575 aaPredicted RBP11.76□□□□□ -0.53
CKAP2-202ENST00000378034 SPOCK3Q9BQ16 436 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 ENKD1Q9H0I2 346 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 OPN3Q9H1Y3 402 aaPredicted RBP11.76□□□□□ -0.53
CKAP2-202ENST00000378034 NPDC1Q9NQX5 325 aaPredicted RBP11.76□□□□□ -0.53
CKAP2-202ENST00000378034 NANSQ9NR45 359 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 NOSIPQ9Y314 301 aaKnown RBP11.76□□□□□ -0.53
CKAP2-202ENST00000378034 ICE1Q9Y2F5 2266 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 SPTAN1Q13813 2472 aaKnown RBP11.76□□□□□ -0.53
CKAP2-202ENST00000378034 CH25HO95992 272 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 HIST1H2ABP04908 130 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 UMPSP11172 480 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 IGFBP2P18065 325 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 GRNP28799 593 aaKnown RBP11.76□□□□□ -0.53
CKAP2-202ENST00000378034 OR3A2P47893 321 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 SORDQ00796 357 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 CHRNB3Q05901 458 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 FAM98BQ52LJ0 330 aaKnown RBP11.76□□□□□ -0.53
CKAP2-202ENST00000378034 ZNF474Q6S9Z5 364 aaPredicted RBP11.76□□□□□ -0.53
CKAP2-202ENST00000378034 TFAP2EQ6VUC0 442 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 HIST3H2AQ7L7L0 130 aa11.76□□□□□ -0.53
CKAP2-202ENST00000378034 ZDHHC21Q8IVQ6 265 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms