RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 EXT1Q16394 746 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF620Q6ZNG0 422 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF565Q8N9K5 539 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 FAM183AA6NL82 134 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 NDUFB5O43674 189 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 SLC2A5P22732 501 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF141Q15928 474 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 LY6G5CQ5SRR4 150 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 VITQ6UXI7 678 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF251Q9BRH9 671 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 CNTNAP3Q9BZ76 1288 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 RNF208Q9H0X6 261 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 CRLF2Q9HC73 371 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 HRASLS2Q9NWW9 162 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ZFAND5O76080 213 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 FGF18O76093 207 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 BCHEP06276 602 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 TACR1P25103 407 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 MAN2A2P49641 1150 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 IGFBP7Q16270 282 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 PGBD2Q6P3X8 592 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 HFE2Q6ZVN8 426 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 CADM4Q8NFZ8 388 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 IL23AQ9NPF7 189 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 GABRPO00591 440 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 AKR7A2O43488 359 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 PRH1P02810 166 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 CTSLP07711 333 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 SLC11A1P49279 550 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 OR13C8Q8NGS7 320 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 CXorf58Q96LI9 332 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 PDHA2P29803 388 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 BDKRB2P30411 391 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 AADACL4Q5VUY2 407 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 KIAA0895LQ68EN5 471 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 TMEM121BQ9BXQ6 578 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-201ENST00000377861 SEC11CQ9BY50 192 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 PRKCGP05129 697 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 SOX4Q06945 474 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-201ENST00000377861 GGTLC2Q14390 218 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 STEAP1BQ6NZ63 245 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 FAM129CQ86XR2 697 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 CNIH3Q8TBE1 160 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 FNDC9Q8TBE3 224 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ABCG8Q9H221 673 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 REEP5Q00765 189 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 OR10R2Q8NGX6 335 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 OR2A14Q96R47 310 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 LAT2Q9GZY6 243 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 UFSP2Q9NUQ7 469 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 GNG8Q9UK08 70 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 PIK3C2AO00443 1686 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 BEST1O76090 585 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 PER3P56645 1201 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 SPRED3Q2MJR0 410 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 TMEM30BQ3MIR4 351 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ATAD3CQ5T2N8 411 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 BHLHE40O14503 412 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 IGHG1P01857 330 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 HTR2CP28335 458 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ROM1Q03395 351 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ENDOGQ14249 297 aaKnown RBP4.57□□□□□ -1.68
PCDH9-201ENST00000377861 PRAMEF20Q5VT98 475 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 LINC00596Q86U02 117 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 MKXQ8IYA7 352 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 EXD3Q8N9H8 876 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 MOCOSQ96EN8 888 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 CHRNA9Q9UGM1 479 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 NEU3Q9UQ49 428 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 A0A1W2PQD3 144 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 CRYBB2P43320 205 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 TBPL1P62380 186 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ABHD1Q96SE0 405 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 CPA4Q9UI42 421 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 IL11RAQ14626 422 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 PHF19Q5T6S3 580 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 OTOP2Q7RTS6 562 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 NME7Q9Y5B8 376 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 B3GLCTQ6Y288 498 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 MFSD8Q8NHS3 518 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 C9J4A7 227 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 RUNX3Q13761 415 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 LILRA6Q6PI73 481 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 RAB40CQ96S21 281 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 B3GNT4Q9C0J1 378 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 ZSCAN5BA6NJL1 495 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 WBP4O75554 376 aaKnown RBP4.57□□□□□ -1.68
PCDH9-201ENST00000377861 GLDNQ6ZMI3 551 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-201ENST00000377861 NRMQ8IXM6 262 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 OR2L3Q8NG85 312 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 TRA2AQ13595 282 aaKnown RBP eCLIP4.57□□□□□ -1.68
PCDH9-201ENST00000377861 GTDC1Q4AE62 458 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 MDGA1Q8NFP4 955 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 OR1E3Q8WZA6 343 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 SMPDL3BQ92485 455 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 C16orf58Q96GQ5 468 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 INIPQ9NRY2 104 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 KCNIP1Q9NZI2 227 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 TBXA2RP21731 343 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 P2RX3P56373 397 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms