RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ART1P52961 327 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 GP2P55259 537 aaKnown RBP13.32□□□□□ -0.28
TCOF1-202ENST00000377797 SNTB2Q13425 540 aaKnown RBP13.32□□□□□ -0.28
TCOF1-202ENST00000377797 MELKQ14680 651 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 KIRREL2Q6UWL6 708 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 OR5J2Q8NH18 312 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 ZNF764Q96H86 408 aaPredicted RBP13.32□□□□□ -0.28
TCOF1-202ENST00000377797 CDCP1Q9H5V8 836 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 MOKQ9UQ07 419 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 DCDC2BA2VCK2 349 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 TNFSF8P32971 234 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 GNG2P59768 71 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 PRICKLE4Q2TBC4 344 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 USP51Q70EK9 711 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 GHSRQ92847 366 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 CITED4Q96RK1 184 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 MBD2Q9UBB5 411 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 BOKQ9UMX3 212 aaPredicted RBP13.32□□□□□ -0.28
TCOF1-202ENST00000377797 LOC100509620A0A075B734 347 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 GLYR1Q49A26 553 aaPredicted RBP13.32□□□□□ -0.28
TCOF1-202ENST00000377797 ZNF704Q6ZNC4 412 aaPredicted RBP13.32□□□□□ -0.28
TCOF1-202ENST00000377797 C1orf210Q8IVY1 113 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 ESX1Q8N693 406 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 GDPD1Q8N9F7 314 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 ZSCAN1Q8NBB4 408 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 OR8S1Q8NH09 359 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 GIMAP5Q96F15 307 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 PLEK2Q9NYT0 353 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 CCDC59Q9P031 241 aaKnown RBP13.32□□□□□ -0.28
TCOF1-202ENST00000377797 RASD1Q9Y272 281 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 TNFSF14O43557 240 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 RPL22L1Q6P5R6 122 aaKnown RBP13.31□□□□□ -0.28
TCOF1-202ENST00000377797 LINC00696Q6ZRV3 163 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 KCTD20Q7Z5Y7 419 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 TMED4Q7Z7H5 227 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 ARMC10Q8N2F6 343 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 ZNF417Q8TAU3 575 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 FAM71F1Q96KD3 344 aaPredicted RBP13.31□□□□□ -0.28
TCOF1-202ENST00000377797 NUDT9Q9BW91 350 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 FSCN3Q9NQT6 498 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 FBXO34Q9NWN3 711 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 TXNL4BQ9NX01 149 aaKnown RBP13.31□□□□□ -0.28
TCOF1-202ENST00000377797 FARSAQ9Y285 508 aaKnown RBP13.31□□□□□ -0.28
TCOF1-202ENST00000377797 GPR55Q9Y2T6 319 aaPredicted RBP13.31□□□□□ -0.28
TCOF1-202ENST00000377797 PMF1-BGLAPU3KQ54 211 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 SPTBN2O15020 2390 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 IGKV1-8A0A0C4DH67 115 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 ZNF593O00488 134 aaPredicted RBP13.31□□□□□ -0.28
TCOF1-202ENST00000377797 SIRPAP78324 504 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 TBC1D25Q3MII6 688 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 FOXB2Q5VYV0 432 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 PAQR6Q6TCH4 344 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 TBC1D15Q8TC07 691 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 LMF1Q96S06 567 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 CMC2Q9NRP2 79 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 MEGF11A6BM72 1044 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 PLATP00750 562 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 CT62P0C5K7 136 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 PSPHP78330 225 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 CAMK2DQ13557 499 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 BPHLQ86WA6 291 aaPredicted RBP13.31□□□□□ -0.28
TCOF1-202ENST00000377797 SLC22A18ASQ8N1D0 253 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 ZNF566Q969W8 418 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 SLC52A3Q9NQ40 469 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 VWA8A3KMH1 1905 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 GPRIN2O60269 458 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 PNLIPRP2P54317 469 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 RAB11BQ15907 218 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 UBE2UQ5VVX9 321 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 TMEM17Q86X19 198 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 SLC43A2Q8N370 569 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 ARHGDIGQ99819 225 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 ZNF639Q9UID6 485 aa13.31□□□□□ -0.28
TCOF1-202ENST00000377797 ABCA7Q8IZY2 2146 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 A0A1B0GVC2 190 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 TMEM269A0A1B0GVZ9 245 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 A6NIN4 97 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 METTL15A6NJ78 407 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 SBK2P0C263 348 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 ERGP11308 486 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 PIPP12273 146 aaPredicted RBP13.3□□□□□ -0.28
TCOF1-202ENST00000377797 MSX1P28360 303 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 ZFP36L2P47974 494 aaKnown RBP13.3□□□□□ -0.28
TCOF1-202ENST00000377797 SIRT6Q8N6T7 355 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 VN1R1Q9GZP7 353 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 LAT2Q9GZY6 243 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 ZNF160Q9HCG1 818 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 ZC3H12DA2A288 527 aaKnown RBP13.3□□□□□ -0.28
TCOF1-202ENST00000377797 FRG2CA6NGY1 282 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 OR6C76A6NM76 312 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 DPM1O60762 260 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 C1QCP02747 245 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 PGAM2P15259 253 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 TEKQ02763 1124 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 C6orf15Q6UXA7 325 aaPredicted RBP13.3□□□□□ -0.28
TCOF1-202ENST00000377797 LANCL3Q6ZV70 420 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 NANOGP1Q8N7R0 232 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 UTP23Q9BRU9 249 aaKnown RBP13.3□□□□□ -0.28
TCOF1-202ENST00000377797 ULBP2Q9BZM5 246 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms