RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 KLK2P20151 261 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 GRPRP30550 384 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 YAP1P46937 504 aaKnown RBP12.9□□□□□ -0.34
UBE4B-203ENST00000377153 SORDQ00796 357 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 FOXD4Q12950 439 aaPredicted RBP12.9□□□□□ -0.34
UBE4B-203ENST00000377153 BNIP1Q12981 228 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 TRAM2Q15035 370 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 CASP12Q6UXS9 341 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 CYP2R1Q6VVX0 501 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 LINC00114Q6XXX2 140 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 WDR88Q6ZMY6 472 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 OR9K2Q8NGE7 335 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 ZNF417Q8TAU3 575 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 TMEM255BQ8WV15 326 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 TMEM239Q8WW34 195 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 TAAR8Q969N4 342 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 PYURFQ96I23 114 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 ZNF587Q96SQ5 575 aaPredicted RBP12.9□□□□□ -0.34
UBE4B-203ENST00000377153 ZNF426Q9BUY5 554 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 KRCC1Q9NPI7 259 aaPredicted RBP12.9□□□□□ -0.34
UBE4B-203ENST00000377153 NPDC1Q9NQX5 325 aaPredicted RBP12.9□□□□□ -0.34
UBE4B-203ENST00000377153 NANSQ9NR45 359 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 PLSCR4Q9NRQ2 329 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 PARPBPQ9NWS1 579 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 MED31Q9Y3C7 131 aa12.9□□□□□ -0.34
UBE4B-203ENST00000377153 COL12A1Q99715 3063 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 HTR3EA5X5Y0 456 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 ZNF814B7Z6K7 855 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 C19orf84I3L1E1 186 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 hCG_2039718K7EN88 272 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 HNRNPRO43390 633 aaKnown RBP12.89□□□□□ -0.35
UBE4B-203ENST00000377153 HIST1H2ABP04908 130 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 FABP3P05413 133 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 ZNF43P17038 809 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 ATP6V1B2P21281 511 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 CD79BP40259 229 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 PMS2P3Q13401 168 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 C1DQ13901 141 aaKnown RBP12.89□□□□□ -0.35
UBE4B-203ENST00000377153 SLC17A1Q14916 467 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 SP5Q6BEB4 398 aaPredicted RBP12.89□□□□□ -0.35
UBE4B-203ENST00000377153 LCN8Q6JVE9 175 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 TFAP2EQ6VUC0 442 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 H1FNTQ75WM6 255 aaPredicted RBP12.89□□□□□ -0.35
UBE4B-203ENST00000377153 HIST3H2AQ7L7L0 130 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 RRM2BQ7LG56 351 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 NANOGNBQ7Z5D8 188 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 TSPYL5Q86VY4 417 aaPredicted RBP12.89□□□□□ -0.35
UBE4B-203ENST00000377153 UBE2J2Q8N2K1 259 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 FAM86B1Q8N7N1 296 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 ADPRHL1Q8NDY3 354 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 HIST1H2ACQ93077 130 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 SPOCK3Q9BQ16 436 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 PRSS27Q9BQR3 290 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 ANKRD19PQ9H560 264 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 FKRPQ9H9S5 495 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 RHCGQ9UBD6 479 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 A4GNTQ9UNA3 340 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 FLVCR1Q9Y5Y0 555 aa12.89□□□□□ -0.35
UBE4B-203ENST00000377153 TUBAL3A6NHL2 446 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 ENO4A6NNW6 628 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 RAMP1O60894 148 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 LYPD3O95274 346 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 CH25HO95992 272 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 CGAP01215 116 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 BGLAPP02818 100 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 MT-ND1P03886 318 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 THY1P04216 161 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 RHCEP18577 417 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 CBLP22681 906 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 COL8A1P27658 744 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 OR3A2P47893 321 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 SMIM11AP58511 58 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 POU4F3Q15319 338 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 ZNF74Q16587 644 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 FGD3Q5JSP0 725 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 ZNF730Q6ZMV8 503 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 CCDC121Q6ZUS5 278 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 NUFIP2Q7Z417 695 aaKnown RBP12.88□□□□□ -0.35
UBE4B-203ENST00000377153 LSRQ86X29 649 aaPredicted RBP12.88□□□□□ -0.35
UBE4B-203ENST00000377153 NKAIN4Q8IVV8 208 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 UEVLDQ8IX04 471 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 CDK20Q8IZL9 346 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 ZNF610Q8N9Z0 462 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 ZNF775Q96BV0 537 aaPredicted RBP12.88□□□□□ -0.35
UBE4B-203ENST00000377153 SLC7A6OSQ96CW6 309 aaPredicted RBP12.88□□□□□ -0.35
UBE4B-203ENST00000377153 CLPTM1LQ96KA5 538 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 MOGAT1Q96PD6 335 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 PIP5K1AQ99755 562 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 ENKD1Q9H0I2 346 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 MRPL39Q9NYK5 338 aaKnown RBP12.88□□□□□ -0.35
UBE4B-203ENST00000377153 ZNF229Q9UJW7 825 aa12.88□□□□□ -0.35
UBE4B-203ENST00000377153 ING1Q9UK53 422 aaPredicted RBP12.88□□□□□ -0.35
UBE4B-203ENST00000377153 J3KTA2 159 aa12.87□□□□□ -0.35
UBE4B-203ENST00000377153 EBAG9O00559 213 aa12.87□□□□□ -0.35
UBE4B-203ENST00000377153 FZD7O75084 574 aa12.87□□□□□ -0.35
UBE4B-203ENST00000377153 CNOT4O95628 575 aaKnown RBP12.87□□□□□ -0.35
UBE4B-203ENST00000377153 IGF2P01344 180 aa12.87□□□□□ -0.35
UBE4B-203ENST00000377153 H1F0P07305 194 aaKnown RBP12.87□□□□□ -0.35
UBE4B-203ENST00000377153 IGFBP2P18065 325 aa12.87□□□□□ -0.35
UBE4B-203ENST00000377153 AHCYP23526 432 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms