RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 SAMD4BQ5PRF9 694 aaKnown RBP1.43□□□□□ -2.18
VPS13A-206ENST00000376646 TIGD3Q6B0B8 471 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 ENPP6Q6UWR7 440 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 Q6ZN92 141 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 UTS2BQ765I0 119 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 GDPD3Q7L5L3 318 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 ERI1Q8IV48 349 aaKnown RBP1.43□□□□□ -2.18
VPS13A-206ENST00000376646 SLC22A9Q8IVM8 553 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 RDH10Q8IZV5 341 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 C6orf223Q8N319 242 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 ACOT4Q8N9L9 421 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 C7orf33Q8WU49 177 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 DNAJA4Q8WW22 397 aaPredicted RBP1.43□□□□□ -2.18
VPS13A-206ENST00000376646 DCUN1D4Q92564 292 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 NT5C3BQ969T7 300 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.43□□□□□ -2.18
VPS13A-206ENST00000376646 RPUSD4Q96CM3 377 aaKnown RBP1.43□□□□□ -2.18
VPS13A-206ENST00000376646 TSG101Q99816 390 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 NARFLQ9H6Q4 476 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 METTL7AQ9H8H3 244 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 RPS6KB2Q9UBS0 482 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 SUN2Q9UH99 717 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 ZNF639Q9UID6 485 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 BTNL2Q9UIR0 455 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 SH3TC1Q8TE82 1336 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 IGHV3OR16-13A0A075B7E8 117 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 FAM240BA0A1B0GVZ2 78 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 LOC110117498-PIK3R3F6TDL0 507 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 GOLGA8SH3BPF8 625 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 HAS3O00219 553 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 ABCD4O14678 606 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 TOM1O60784 492 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 ZNF780AO75290 641 aaPredicted RBP1.43□□□□□ -2.18
VPS13A-206ENST00000376646 MMP23AO75900 390 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 SUPT7LO94864 414 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 CLDN9O95484 217 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 GAPDHP04406 335 aaKnown RBP1.43□□□□□ -2.18
VPS13A-206ENST00000376646 IGKV3-11P04433 115 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 P04436 131 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 MX1P20591 662 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 FUT3P21217 361 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 GABRR1P24046 479 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 COX7A1P24310 79 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 CD1CP29017 333 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 TPMTP51580 245 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 CRYBB1P53674 252 aaPredicted RBP1.43□□□□□ -2.18
VPS13A-206ENST00000376646 OGDHQ02218 1023 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 ASPHQ12797 758 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 PARP15Q460N3 678 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 EOGTQ5NDL2 527 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 MARCH8Q5T0T0 291 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 CCDC183Q5T5S1 534 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 C1orf146Q5VVC0 180 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 SLC26A11Q86WA9 606 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 UBE2J2Q8N2K1 259 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 FAM83FQ8NEG4 500 aaPredicted RBP1.43□□□□□ -2.18
VPS13A-206ENST00000376646 SDR9C7Q8NEX9 313 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 OR2L5Q8NG80 312 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 OR1L6Q8NGR2 347 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 AKR7LQ8NHP1 331 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 BRSK1Q8TDC3 778 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 C12orf42Q96LP6 360 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 ZNF641Q96N77 438 aaPredicted RBP1.43□□□□□ -2.18
VPS13A-206ENST00000376646 PANX2Q96RD6 677 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 TCHPQ9BT92 498 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 SELENOIQ9C0D9 397 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 PPA2Q9H2U2 334 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 AZI2Q9H6S1 392 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 ZDHHC11Q9H8X9 412 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 SH2D2AQ9NP31 389 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 AIG1Q9NVV5 245 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 ADAM22Q9P0K1 906 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 NAP1L2Q9ULW6 460 aaPredicted RBP1.43□□□□□ -2.18
VPS13A-206ENST00000376646 TMCO1Q9UM00 188 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 KCNIP3Q9Y2W7 256 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 NPTNQ9Y639 398 aa1.43□□□□□ -2.18
VPS13A-206ENST00000376646 KANK1Q14678 1352 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 XKRY2A2RUG3 117 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 ACTL6AO96019 429 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 CD1BP29016 333 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 IL12AP29459 219 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 SSR1P43307 286 aaKnown RBP1.42□□□□□ -2.18
VPS13A-206ENST00000376646 CDH4P55283 916 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 ACTR3P61158 418 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 RPL23AP62750 156 aaKnown RBP1.42□□□□□ -2.18
VPS13A-206ENST00000376646 OR5I1Q13606 314 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 GK3PQ14409 553 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 MICBQ29980 383 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 ZNF630Q2M218 657 aaPredicted RBP1.42□□□□□ -2.18
VPS13A-206ENST00000376646 PAGE3Q5JUK9 113 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 CTSL3PQ5NE16 218 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 PRAMEF5Q5TYX0 476 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 PRAMEF6Q5VXH4 476 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 C11orf71Q6IPW1 123 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 TIFABQ6ZNK6 161 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 RUFY3Q7L099 469 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 H2BFWTQ7Z2G1 175 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 TGIF2LXQ8IUE1 241 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 NUDCD3Q8IVD9 361 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 CDH26Q8IXH8 852 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms