RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 CATP04040 527 aaKnown RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 ATP1B1P05026 303 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 BCHEP06276 602 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 ADCYAP1P18509 176 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 AKR1C2P52895 323 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 PPIAP62937 165 aaKnown RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 SORDQ00796 357 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 AKR1C1Q04828 323 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 PIN1Q13526 163 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 LINC00303Q3SY05 128 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 OR7E24Q6IFN5 339 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 C1orf94Q6P1W5 598 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 AGTRAPQ6RW13 159 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 MRGPREQ86SM8 312 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 TMPRSS11BQ86T26 416 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 RBM45Q8IUH3 476 aaKnown RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 ZSCAN1Q8NBB4 408 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 CCL4L1Q8NHW4 92 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 PPCDCQ96CD2 204 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 PHYHIPLQ96FC7 376 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 TMEM121BQ9BXQ6 578 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 DHCR7Q9UBM7 475 aaKnown RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 METTL1Q9UBP6 276 aaKnown RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 ANHXE9PGG2 379 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 GABARAPH6UMI1 98 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 EIF4E2O60573 245 aaKnown RBP11.19□□□□□ -0.62
C9orf3-203ENST00000375315 UGDHO60701 494 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 ADH1BP00325 375 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 TIA1P31483 386 aaKnown RBP eCLIP11.19□□□□□ -0.62
C9orf3-203ENST00000375315 PRLHRP49683 370 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 ACTR1AP61163 376 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 DOC2AQ14183 400 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 C9orf152Q5JTZ5 239 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 SSX9Q7RTT3 188 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 OR2W3Q7Z3T1 314 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 ADCK2Q7Z695 626 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 MISPQ8IVT2 679 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 OR1S2Q8NGQ3 325 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 ASB13Q8WXK3 278 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 HDAC8Q9BY41 377 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 ZCCHC2Q9C0B9 1178 aaKnown RBP11.19□□□□□ -0.62
C9orf3-203ENST00000375315 ISG20L2Q9H9L3 353 aaKnown RBP11.19□□□□□ -0.62
C9orf3-203ENST00000375315 RNF122Q9H9V4 155 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 LMAN1LQ9HAT1 526 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 ASF1BQ9NVP2 202 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 E9PI62 339 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 ICOSLGO75144 302 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 NDUFB6O95139 128 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 MNDAP41218 407 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 NPBWR1P48145 328 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 MECP2P51608 486 aaKnown RBP11.19□□□□□ -0.62
C9orf3-203ENST00000375315 FABP9Q0Z7S8 132 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 MPPED2Q15777 294 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 C10orf91Q5T1B1 145 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 OLFML2AQ68BL7 652 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 RAB12Q6IQ22 244 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 ZCCHC12Q6PEW1 402 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 TSSK4Q6SA08 328 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 DNAAF1Q8NEP3 725 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 OR2AK2Q8NG84 335 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 OR4D9Q8NGE8 314 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 OR52B4Q8NGK2 314 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 OR5W2Q8NH69 310 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 SLC25A28Q96A46 364 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 PHF7Q9BWX1 381 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-203ENST00000375315 TREM2Q9NZC2 230 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 PCDHGA5Q9Y5G8 931 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 SIRT4Q9Y6E7 314 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-203ENST00000375315 CACNA1IQ9P0X4 2223 aa11.19□□□□□ -0.62
C9orf3-203ENST00000375315 RFPL4AA6NLU0 287 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 DBX1A6NMT0 343 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 RFPL4AL1F8VTS6 287 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 PSMB5P28074 263 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 BDKRB2P30411 391 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 HTR1FP30939 366 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 TNFRSF4P43489 277 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 RELQ04864 619 aaPredicted RBP11.18□□□□□ -0.62
C9orf3-203ENST00000375315 IL10RAQ13651 578 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 AADACL4Q5VUY2 407 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 ZNF546Q86UE3 836 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 DCUN1D3Q8IWE4 304 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 SFTPA2Q8IWL1 248 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 ACBD7Q8N6N7 88 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 OR52I2Q8NH67 350 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 ABHD4Q8TB40 342 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 BRIX1Q8TDN6 353 aaKnown RBP11.18□□□□□ -0.62
C9orf3-203ENST00000375315 TNFAIP8L1Q8WVP5 186 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 FCAMRQ8WWV6 532 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 TFGQ92734 400 aaPredicted RBP11.18□□□□□ -0.62
C9orf3-203ENST00000375315 CNTNAP3BQ96NU0 1288 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 JAM3Q9BX67 310 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 SLC12A9Q9BXP2 914 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 BRF2Q9HAW0 419 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 LRRK1Q38SD2 2015 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 CCDC88CQ9P219 2028 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 C8GP07360 202 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 ABOP16442 354 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 ATF1P18846 271 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 EIF2S3P41091 472 aaKnown RBP11.18□□□□□ -0.62
C9orf3-203ENST00000375315 LUMP51884 338 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms