RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CDC34P49427 236 aaPredicted RBP6.18□□□□□ -1.42
UBR4-204ENST00000375254 TRA2BP62995 288 aaKnown RBP6.18□□□□□ -1.42
UBR4-204ENST00000375254 SHC2P98077 582 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 SLC16A13Q7RTY0 426 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 DTWD2Q8NBA8 298 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 OR13C5Q8NGS8 318 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 OR9A1PQ8NGU1 263 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 ZNF107Q9UII5 783 aaPredicted RBP6.18□□□□□ -1.42
UBR4-204ENST00000375254 B3GALT1Q9Y5Z6 326 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 A0A0U1RQK1 487 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 ZNF320A2RRD8 509 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 SELENOVP59797 346 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 PPP1R8Q12972 351 aaKnown RBP6.18□□□□□ -1.42
UBR4-204ENST00000375254 ZNF845Q96IR2 970 aaPredicted RBP6.18□□□□□ -1.42
UBR4-204ENST00000375254 ANKRD66B4E2M5 251 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 BLOC1S5-TXNDC5H3BN57 136 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 RNGTTO60942 597 aaKnown RBP6.18□□□□□ -1.42
UBR4-204ENST00000375254 LINC00614P0C842 121 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 RD3LP0DJH9 198 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 SLC24A5Q71RS6 500 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 FBXO16Q8IX29 292 aaPredicted RBP6.18□□□□□ -1.42
UBR4-204ENST00000375254 CORINQ9Y5Q5 1042 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 TNRQ92752 1358 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 SLC16A7O60669 478 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 ELOCQ15369 112 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 C9orf152Q5JTZ5 239 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 PHYKPLQ8IUZ5 450 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 TMEM174Q8WUU8 243 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 C4orf36Q96KX1 117 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 ANGPTL4Q9BY76 406 aa6.18□□□□□ -1.42
UBR4-204ENST00000375254 A0A1B0GV50 99 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 NDUFB2O95178 105 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 PMP2P02689 132 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 ITGB2P05107 769 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 TBXA2RP21731 343 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 ACAA2P42765 397 aaKnown RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 TECRLQ5HYJ1 363 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 CNTN4Q8IWV2 1026 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 PDZD7Q9H5P4 517 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 TMEM262E9PQX1 116 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 STC2O76061 302 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 KCNK5O95279 499 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 AHRP35869 848 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 FAM3BP58499 235 aaPredicted RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 ARF6P62330 175 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 DHODHQ02127 395 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 FKBP1CQ5VVH2 108 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 OR52L2PQ8NGH6 319 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 LPAR3Q9UBY5 353 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 STYXL1Q9Y6J8 313 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 PLSCR5A0PG75 271 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 CEBPDP49716 269 aaPredicted RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 NPY4RP50391 375 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 OR8G1Q15617 311 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 ZNF322Q6U7Q0 402 aaPredicted RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 NXPE4Q6UWF7 544 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 FAM129CQ86XR2 697 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 OR4K14Q8NGD5 310 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 LRRN4Q8WUT4 740 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 RELTQ969Z4 430 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 RHBGQ9H310 441 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 DNAJC5Q9H3Z4 198 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 ZNF701Q9NV72 531 aaPredicted RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 NRASP01111 189 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 HRASP01112 189 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 KRASP01116 189 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 PGA4P0DJD7 388 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 PGA5P0DJD9 388 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 OSGIN2Q9Y236 505 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 ARHGEF40Q8TER5 1519 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 A6NL46 340 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 UBE2Q2LH0YL09 131 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 TBX19O60806 448 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 DMWDQ09019 674 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 FAM109BQ6ICB4 259 aaPredicted RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 ZNF429Q86V71 674 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 GLIS3Q8NEA6 775 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 OR8J2Q8NGG1 315 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 NSUN3Q9H649 340 aaKnown RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 C1QTNF3-AMACRE9PGA6 284 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 WDR1O75083 606 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 NPBWR2P48146 333 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 SLC25A11Q02978 314 aaKnown RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 MALLQ13021 153 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 SGCAQ16586 387 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 ZNF468Q5VIY5 522 aaPredicted RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 LMF1Q96S06 567 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 NKX3-1Q99801 234 aaPredicted RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 HDAC8Q9BY41 377 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 NRCAMQ92823 1304 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 DUOX2Q9NRD8 1548 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 ARSDP51689 593 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 EBPQ15125 230 aaKnown RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 LRFN4Q6PJG9 635 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 DPPA3Q6W0C5 159 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 OR4B1Q8NGF8 309 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 FBXL18Q96ME1 805 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 GMLQ99445 158 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 FPR3P25089 353 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 NCR3LG1Q68D85 454 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms