RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 MYADMQ96S97 322 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 DOK1Q99704 481 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 PSTPIP1O43586 416 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 TRMUO75648 421 aaKnown RBP8.24□□□□□ -1.09
UBR4-201ENST00000375218 SUPT7LO94864 414 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 ETHE1O95571 254 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 EFEMP2O95967 443 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 OMGP23515 440 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 PAX6P26367 422 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 KCNJ3P48549 501 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 UCNP55089 124 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 SF3A2Q15428 464 aaKnown RBP8.24□□□□□ -1.09
UBR4-201ENST00000375218 CBLN3Q6UW01 205 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 Q6ZPB1 254 aaPredicted RBP8.24□□□□□ -1.09
UBR4-201ENST00000375218 Q6ZVL8 140 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 GPAT4Q86UL3 456 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 OR2AP1Q8NGE2 309 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 PPTC7Q8NI37 304 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 ZNF419Q96HQ0 510 aaPredicted RBP8.24□□□□□ -1.09
UBR4-201ENST00000375218 NPAS1Q99742 590 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 RAB34Q9BZG1 259 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 PLAC1Q9HBJ0 212 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 CDC42EP3Q9UKI2 254 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 AUP1Q9Y679 476 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 KIAA1324LA8MWY0 1029 aaPredicted RBP8.24□□□□□ -1.09
UBR4-201ENST00000375218 IFNA10P01566 189 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 AMY1AP04745 511 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 UGT2B7P16662 529 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 HTR2CP28335 458 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 CD81P60033 236 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 RAB2AP61019 212 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 ZNF789Q5FWF6 425 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 SYT6Q5T7P8 510 aaPredicted RBP8.24□□□□□ -1.09
UBR4-201ENST00000375218 ATRAIDQ6UW56 229 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 GLB1LQ6UWU2 654 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 PARS2Q7L3T8 475 aaKnown RBP8.24□□□□□ -1.09
UBR4-201ENST00000375218 TMEM135Q86UB9 458 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 OR9A4Q8NGU2 314 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 OR6K3Q8NGY3 331 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 TM9SF4Q92544 642 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 ANKRD9Q96BM1 317 aaPredicted RBP8.24□□□□□ -1.09
UBR4-201ENST00000375218 ZFP3Q96NJ6 502 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 ZNF426Q9BUY5 554 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 OSBPL11Q9BXB4 747 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 CDCA4Q9BXL8 241 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 NT5DC2Q9H857 520 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 NLE1Q9NVX2 485 aaPredicted RBP8.24□□□□□ -1.09
UBR4-201ENST00000375218 PPIAL4DF5H284 164 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 FDXRP22570 491 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 CD200P41217 278 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 KCNQ1P51787 676 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 RABGGTBP53611 331 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 SHC2P98077 582 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 MGAT2Q10469 447 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 OR8G2PQ6IF36 304 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 TMEM173Q86WV6 379 aaPredicted RBP8.24□□□□□ -1.09
UBR4-201ENST00000375218 OR51G2Q8NGK0 314 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 CD200R1Q8TD46 325 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 SUCNR1Q9BXA5 334 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 HDHD5Q9BXW7 423 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 ATXN3LQ9H3M9 355 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 EML4Q9HC35 981 aaKnown RBP8.24□□□□□ -1.09
UBR4-201ENST00000375218 HCSTQ9UBK5 93 aa8.24□□□□□ -1.09
UBR4-201ENST00000375218 ANKRD36A6QL64 1941 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 A0A096LPI6 279 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 A0A1B0GVI7 797 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 C9orf170A2RU37 121 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 FCN3O75636 299 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 CDH2P19022 906 aaPredicted RBP8.23□□□□□ -1.09
UBR4-201ENST00000375218 SLC37A1P57057 533 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 NFATC2Q13469 925 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 TNK1Q13470 666 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 SLC35D3Q5M8T2 416 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 ATG4DQ86TL0 474 aaPredicted RBP8.23□□□□□ -1.09
UBR4-201ENST00000375218 PHF13Q86YI8 300 aaPredicted RBP8.23□□□□□ -1.09
UBR4-201ENST00000375218 PTH2Q96A98 100 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 ZBED6CLQ96FA7 236 aaPredicted RBP8.23□□□□□ -1.09
UBR4-201ENST00000375218 SPSB2Q99619 263 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 ECSITQ9BQ95 431 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 LANCL2Q9NS86 450 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 LHX6Q9UPM6 363 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 CDH10Q9Y6N8 788 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 C9J4A7 227 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 SLC34A2O95436 690 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 MMP11P24347 488 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 CNR2P34972 360 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 NPBWR1P48145 328 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 ZP1P60852 638 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 HNRNPA0Q13151 305 aaKnown RBP8.23□□□□□ -1.09
UBR4-201ENST00000375218 BIKQ13323 160 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 FAM153CQ494X1 144 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 SMARCD3Q6STE5 483 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 UBE3DQ7Z6J8 389 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 SORCS1Q8WY21 1168 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.23□□□□□ -1.09
UBR4-201ENST00000375218 PRAP1Q96NZ9 151 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 YIPF1Q9Y548 306 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 PTGESO14684 152 aa8.23□□□□□ -1.09
UBR4-201ENST00000375218 RNASEH1O60930 286 aaKnown RBP8.23□□□□□ -1.09
UBR4-201ENST00000375218 FAM107AO95990 144 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms