RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 MMABQ96EY8 250 aaPredicted RBP14.19□□□□□ -0.14
CCDC40-202ENST00000374876 OR10H1Q9Y4A9 318 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 CCDC182A6NF36 153 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 OR2W5A6NFC9 320 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 GTPBP1O00178 669 aaKnown RBP14.19□□□□□ -0.14
CCDC40-202ENST00000374876 DYRK3O43781 588 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 NCR1O76036 304 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 IFNGP01579 166 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 MT-ND5P03915 603 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 NGFRP08138 427 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 MRPL3P09001 348 aaKnown RBP14.19□□□□□ -0.14
CCDC40-202ENST00000374876 TCN2P20062 427 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 MAOAP21397 527 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 RFX2P48378 723 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 DBPQ10586 325 aaPredicted RBP14.19□□□□□ -0.14
CCDC40-202ENST00000374876 AGAP6Q5VW22 663 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 ARHGAP11AQ6P4F7 1023 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 CYB561A3Q8NBI2 242 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 CHAC2Q8WUX2 184 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 SLC35B4Q969S0 331 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 AGAP4Q96P64 663 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 ATF6BQ99941 703 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 ERVK-19Q9WJR5 959 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 GRIP1Q9Y3R0 1128 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 MAU2Q9Y6X3 613 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 IFNA16P05015 189 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 CSF3P09919 207 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 CFL1P23528 166 aaKnown RBP14.18□□□□□ -0.14
CCDC40-202ENST00000374876 F8A1P23610 371 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 OR1D4P47884 311 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 ATP12AP54707 1039 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 ASAH1Q13510 395 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 ZNF362Q5T0B9 420 aaPredicted RBP14.18□□□□□ -0.14
CCDC40-202ENST00000374876 ZNF385CQ66K41 422 aaPredicted RBP14.18□□□□□ -0.14
CCDC40-202ENST00000374876 MZT2AQ6P582 158 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 KIRREL2Q6UWL6 708 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 ZNF517Q6ZMY9 492 aaPredicted RBP14.18□□□□□ -0.14
CCDC40-202ENST00000374876 TMEM91Q6ZNR0 172 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 GPALPP1Q8IXQ4 340 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 SLC43A2Q8N370 569 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 OR5W2Q8NH69 310 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 NEDD4LQ96PU5 975 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 TIMP4Q99727 224 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 SLC22A4Q9H015 551 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 MCCC2Q9HCC0 563 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 ENAMQ9NRM1 1142 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 SRPK3Q9UPE1 567 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 FER1L5A0AVI2 2057 aa14.18□□□□□ -0.14
CCDC40-202ENST00000374876 SHISA3A0PJX4 238 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 NPIPB9F8W1W9 429 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 GNB5O14775 395 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 EFSO43281 561 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 HPGDSO60760 199 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 CSTAP01040 98 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 SBK2P0C263 348 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 CLUP10909 449 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 MADCAM1Q13477 382 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 CNIH2Q6PI25 160 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 LRRC69Q6ZNQ3 347 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 RAB43Q86YS6 212 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 CMIPQ8IY22 773 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 C16orf52Q8NHV5 167 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 CT55Q8WUE5 264 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 LRFN5Q96NI6 719 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 OR10A5Q9H207 317 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 ADGRL4Q9HBW9 690 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 MKKSQ9NPJ1 570 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-202ENST00000374876 NPAP1Q9NZP6 1156 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 IL17BQ9UHF5 180 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 MRPS18BQ9Y676 258 aaKnown RBP14.17□□□□□ -0.14
CCDC40-202ENST00000374876 SIRT4Q9Y6E7 314 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-202ENST00000374876 ANKRD11Q6UB99 2663 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-202ENST00000374876 CFAP47Q6ZTR5 3102 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 A0A1B0GX78 115 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 CT45A8P0DMV1 189 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 CT45A9P0DMV2 189 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 LIFP15018 202 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 SLC2A5P22732 501 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 DLSTP36957 453 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 GPR143P51810 404 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 HSD17B7P56937 341 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 DCDP81605 110 aaKnown RBP14.17□□□□□ -0.14
CCDC40-202ENST00000374876 ST3GAL2Q16842 350 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 CT45A2Q5DJT8 189 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 FAM69BQ5VUD6 431 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 ZNF544Q6NX49 715 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 ARL9Q6T311 187 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 LINC00114Q6XXX2 140 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 UBQLNLQ8IYU4 475 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 BCORP1Q8N888 145 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 SLC2A12Q8TD20 617 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 SMPDL3BQ92485 455 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 ERMAPQ96PL5 475 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-202ENST00000374876 SLC22A11Q9NSA0 550 aa14.17□□□□□ -0.14
CCDC40-202ENST00000374876 SERINC4A6NH21 518 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 CCNKO75909 580 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 NDUFB2O95178 105 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 GYPBP06028 91 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 WT1P19544 449 aaPredicted RBP14.16□□□□□ -0.14
CCDC40-202ENST00000374876 MTNR1BP49286 362 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms