RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 RAB36O95755 333 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 EML2O95834 649 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 PTTG1O95997 202 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 IGFBP1P08833 259 aaPredicted RBP4.38□□□□□ -1.71
USP48-202ENST00000374730 TBC1D3HP0C7X1 549 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 ACP2P11117 423 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 ZNF10P21506 573 aaPredicted RBP4.38□□□□□ -1.71
USP48-202ENST00000374730 DRD1P21728 446 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 HNRNPA2B1P22626 353 aaKnown RBP4.38□□□□□ -1.71
USP48-202ENST00000374730 MST1P26927 711 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 CCKBRP32239 447 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 IFNA8P32881 189 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 S100A5P33763 92 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 SOX6P35712 828 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 TGFBR1P36897 503 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 FEN1P39748 380 aaKnown RBP4.38□□□□□ -1.71
USP48-202ENST00000374730 PSMD7P51665 324 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 SMSP52788 366 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 GAS1P54826 345 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 CASP6P55212 293 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 TAS2R41P59536 307 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 RAB8AP61006 207 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 COPZ1P61923 177 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 ST3GAL3Q11203 375 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 RAB40BQ12829 278 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 TSPAN31Q12999 210 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 HTR4Q13639 388 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 C1DQ13901 141 aaKnown RBP4.38□□□□□ -1.71
USP48-202ENST00000374730 GINS1Q14691 196 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 SHHQ15465 462 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 SPHARQ15513 63 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 MED22Q15528 200 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 DECR1Q16698 335 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 GPAT3Q53EU6 434 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 KLHL22Q53GT1 634 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 SYT14P1Q58G82 188 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 ZNF311Q5JNZ3 666 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 FAM90A2PQ658T7 463 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 TBC1D3GQ6DHY5 549 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 TBC1D3CQ6IPX1 549 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 MFSD12Q6NUT3 480 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 SLC27A4Q6P1M0 643 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 SLC36A4Q6YBV0 504 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 FRRS1Q6ZNA5 592 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 FAM57BQ71RH2 274 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 C16orf62Q7Z3J2 963 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 CCDC190Q86UF4 302 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 UEVLDQ8IX04 471 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 TBC1D3Q8IZP1 549 aaPredicted RBP4.38□□□□□ -1.71
USP48-202ENST00000374730 CYP4Z2PQ8N1L4 340 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 OR2L13Q8N349 312 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 LRRC25Q8N386 305 aaPredicted RBP4.38□□□□□ -1.71
USP48-202ENST00000374730 TCEANCQ8N8B7 351 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 CAMKVQ8NCB2 501 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 OR52I1Q8NGK6 324 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 OR9Q1Q8NGQ5 310 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 PIGXQ8TBF5 258 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 TEX47Q8TBZ9 253 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 TMEM163Q8TC26 289 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 ACOT11Q8WXI4 607 aaPredicted RBP4.38□□□□□ -1.71
USP48-202ENST00000374730 PIGKQ92643 395 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 SIPA1Q96FS4 1042 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 C16orf58Q96GQ5 468 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 ZNF582Q96NG8 517 aaPredicted RBP4.38□□□□□ -1.71
USP48-202ENST00000374730 OR2A5Q96R48 311 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 OR5M11Q96RB7 305 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 IL4I1Q96RQ9 567 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 NEURL2Q9BR09 285 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 CENPOQ9BU64 300 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 RPP25Q9BUL9 199 aaKnown RBP4.38□□□□□ -1.71
USP48-202ENST00000374730 S1PR5Q9H228 398 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 SRMSQ9H3Y6 488 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 LYRM4Q9HD34 91 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 TRPV5Q9NQA5 729 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 MED17Q9NVC6 651 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 NDUFB11Q9NX14 153 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 KLHL28Q9NXS3 571 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 ZNF624Q9P2J8 865 aaPredicted RBP4.38□□□□□ -1.71
USP48-202ENST00000374730 CRNNQ9UBG3 495 aaPredicted RBP4.38□□□□□ -1.71
USP48-202ENST00000374730 MOSPD1Q9UJG1 213 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 FBXW2Q9UKT8 454 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 STUB1Q9UNE7 303 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 SATB2Q9UPW6 733 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 KLHL20Q9Y2M5 609 aa4.38□□□□□ -1.71
USP48-202ENST00000374730 CEP290O15078 2479 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 IQCMA0A1B0GVH7 501 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 OR2W5A6NFC9 320 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 LRRC72A6NJI9 287 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 WASHC1A8K0Z3 465 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 ZNF670-ZNF695F2Z2N8 137 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 LOC110117498-PIK3R3F6TDL0 507 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 BOLA2-SMG1P6H3BVE0 249 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 AP3D1O14617 1153 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 ZSCAN9O15535 394 aaPredicted RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 P2RX6O15547 441 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 TLX3O43711 291 aaPredicted RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 TLX2O43763 284 aaPredicted RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 PRKYO43930 277 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 FMO6PO60774 539 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 AK1P00568 194 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms