RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 CEACAM19Q7Z692 300 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 PRSS58Q8IYP2 241 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 POMGNT2Q8NAT1 580 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 ZSCAN1Q8NBB4 408 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 IL17RDQ8NFM7 739 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 OR2T27Q8NH04 317 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 OR1L3Q8NH93 324 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 ZNF563Q8TA94 476 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 ABHD4Q8TB40 342 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 CCNL2Q96S94 520 aaPredicted RBP11.03□□□□□ -0.64
HMGCL-202ENST00000374487 NMNAT3Q96T66 252 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 CDC6Q99741 560 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 DPYSL5Q9BPU6 564 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 TTTY10Q9BZA0 68 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 SLC22A4Q9H015 551 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 MALT1Q9UDY8 824 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 ZMIZ1Q9ULJ6 1067 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 PAIP2BQ9ULR5 123 aaKnown RBP11.03□□□□□ -0.64
HMGCL-202ENST00000374487 PCDHGB7Q9Y5F8 929 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 NOX1Q9Y5S8 564 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 HTR3EA5X5Y0 456 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 FRG2CA6NGY1 282 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 FAM25AB3EWG3 89 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 FAM25CB3EWG5 89 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 FAM25GB3EWG6 89 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 H3BMH7 237 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 SLC2A2P11168 524 aaPredicted RBP11.03□□□□□ -0.64
HMGCL-202ENST00000374487 FOLR1P15328 257 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 MYL9P24844 172 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 IL12BP29460 328 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 NAA10P41227 235 aaPredicted RBP11.03□□□□□ -0.64
HMGCL-202ENST00000374487 EVX1P49640 407 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 ACTA2P62736 377 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 ERVK-25P63136 954 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 ACTG2P63267 376 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 SELENBP1Q13228 472 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 SKP2Q13309 424 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 VWA2Q5GFL6 755 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 PRR22Q8IZ63 422 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 C19orf18Q8NEA5 215 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 FAM71CQ8NEG0 241 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 OR6K6Q8NGW6 343 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 OR5J2Q8NH18 312 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 SNX33Q8WV41 574 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 OIT3Q8WWZ8 545 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 ACOT12Q8WYK0 555 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 NEDD4LQ96PU5 975 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 RNF32Q9H0A6 362 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 NRIP3Q9NQ35 241 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 NANSQ9NR45 359 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 IGKV3D-11A0A0A0MRZ8 115 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 CDC14CA4D256 554 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 ARPC3O15145 178 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 IDH3BO43837 385 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 SLC19A2O60779 497 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 APEX1P27695 318 aaKnown RBP11.02□□□□□ -0.65
HMGCL-202ENST00000374487 SHC1P29353 583 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 RFX2P48378 723 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 NRG3P56975 720 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 GPLD1P80108 840 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 ASAH1Q13510 395 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 TP53I3Q53FA7 332 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 ARHGAP40Q5TG30 622 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 FNDC7Q5VTL7 733 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 C1orf189Q5VU69 101 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 TRIQKQ629K1 86 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 METAP1DQ6UB28 335 aaPredicted RBP11.02□□□□□ -0.65
HMGCL-202ENST00000374487 APOOLQ6UXV4 268 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 ZNF517Q6ZMY9 492 aaPredicted RBP11.02□□□□□ -0.65
HMGCL-202ENST00000374487 SSX6Q7RTT6 188 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 ATG4DQ86TL0 474 aaPredicted RBP11.02□□□□□ -0.65
HMGCL-202ENST00000374487 RAB43Q86YS6 212 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 Q8N402 240 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 D2HGDHQ8N465 521 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 MS4A15Q8N5U1 240 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 C17orf47Q8NEP4 570 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 IFI44Q8TCB0 444 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 ZNF721Q8TF20 911 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 GHSRQ92847 366 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 DAZLQ92904 295 aaKnown RBP11.02□□□□□ -0.65
HMGCL-202ENST00000374487 TP53INP1Q96A56 240 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 EXOSC3Q9NQT5 275 aaKnown RBP11.02□□□□□ -0.65
HMGCL-202ENST00000374487 GRIP1Q9Y3R0 1128 aa11.02□□□□□ -0.65
HMGCL-202ENST00000374487 IGKV1D-42A0A075B6H8 117 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 OIP5O43482 229 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 GMFGO60234 142 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 DKK1O94907 266 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 DDAH2O95865 285 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 IGKV3-11P04433 115 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 DIO1P49895 249 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 GBX2P52951 348 aaPredicted RBP11.01□□□□□ -0.65
HMGCL-202ENST00000374487 DCAF7P61962 342 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 CFHR1Q03591 330 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 FAM27D1Q5T7N8 215 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 AGAP6Q5VW22 663 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 SLC35F2Q8IXU6 374 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 NPEPL1Q8NDH3 523 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 C7orf57Q8NEG2 295 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 MOSPD2Q8NHP6 518 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 RASD2Q96D21 266 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms