RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 TMEM255BQ8WV15 326 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 INTS12Q96CB8 462 aaKnown RBP16.55■□□□□ 0.24
CDX4-201ENST00000373514 GABARAPL1Q9H0R8 117 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 PAQR5Q9NXK6 330 aaPredicted RBP16.55■□□□□ 0.24
CDX4-201ENST00000373514 PDP1Q9P0J1 537 aaPredicted RBP16.55■□□□□ 0.24
CDX4-201ENST00000373514 CLEC4AQ9UMR7 237 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 HDGFL3Q9Y3E1 203 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 HCFC1P51610 2035 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 KPNA4O00629 521 aaPredicted RBP16.55■□□□□ 0.24
CDX4-201ENST00000373514 RAMP1O60894 148 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 OR5F1O95221 314 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 GADD45GO95257 159 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 IL2RAP01589 272 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 PRKACGP22612 351 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 ALDH3A2P51648 485 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 OR2B6P58173 313 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 MTFR2Q6P444 385 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 LINC00114Q6XXX2 140 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 FCRLAQ7L513 359 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 MRGPRGQ86SM5 289 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 RNF128Q8TEB7 428 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 TM9SF2Q99805 663 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 PRRG4Q9BZD6 226 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 RNF122Q9H9V4 155 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 NMNAT1Q9HAN9 279 aaPredicted RBP16.55■□□□□ 0.24
CDX4-201ENST00000373514 SMURF2Q9HAU4 748 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 MAN2C1Q9NTJ4 1040 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 SEC14L4Q9UDX3 406 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 LIPT2A6NK58 231 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 LRRN3E7EW58 273 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 PIP5K1CO60331 668 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 AHSA1O95433 338 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 HPRP00739 348 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 ALPLP05186 524 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 H1F0P07305 194 aaKnown RBP16.54■□□□□ 0.24
CDX4-201ENST00000373514 TMIGD3P0DMS9 266 aaPredicted RBP16.54■□□□□ 0.24
CDX4-201ENST00000373514 FCGR2AP12318 317 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 CBLP22681 906 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 HSPA13P48723 471 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 CLK1P49759 484 aaKnown RBP16.54■□□□□ 0.24
CDX4-201ENST00000373514 MAP2K6P52564 334 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 HMGA2P52926 109 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 RAC3P60763 192 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 CSNK2A1P68400 391 aaPredicted RBP16.54■□□□□ 0.24
CDX4-201ENST00000373514 PPP2R2BQ00005 443 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 EXOC3L2Q2M3D2 409 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 ANKRD34AQ69YU3 496 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 LIX1LQ8IVB5 337 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 STK35Q8TDR2 534 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 TAAR8Q969N4 342 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 SLC25A36Q96CQ1 311 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 DHRS1Q96LJ7 313 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 RBM4BQ9BQ04 359 aaKnown RBP16.54■□□□□ 0.24
CDX4-201ENST00000373514 RBM4Q9BWF3 364 aaKnown RBP16.54■□□□□ 0.24
CDX4-201ENST00000373514 OSBPL10Q9BXB5 764 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 POTEKPQ9BYX7 375 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 USE1Q9NZ43 259 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 KLHL13Q9P2N7 655 aa16.54■□□□□ 0.24
CDX4-201ENST00000373514 WIPF3A6NGB9 483 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 FAM90A27PA6NNH2 459 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 FTCDNL1E5RQL4 147 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 DLGAP1O14490 977 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 RCBTB2O95199 551 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 ACADSP16219 412 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 LIMS1P48059 325 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 UGT2B15P54855 530 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 SIRPAP78324 504 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 GK3PQ14409 553 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 ABLIM2Q6H8Q1 611 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 VWA1Q6PCB0 445 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 OFCC1Q8IZS5 231 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 RELL2Q8NC24 303 aaPredicted RBP16.53■□□□□ 0.24
CDX4-201ENST00000373514 PIK3C3Q8NEB9 887 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 PFN4Q8NHR9 129 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 ZNF426Q9BUY5 554 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 FNDC11Q9BVV2 318 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 POLR2J2Q9GZM3 115 aaKnown RBP16.53■□□□□ 0.24
CDX4-201ENST00000373514 POLR2J3Q9H1A7 115 aaKnown RBP16.53■□□□□ 0.24
CDX4-201ENST00000373514 TIGARQ9NQ88 270 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 DOPEY1Q5JWR5 2465 aa16.53■□□□□ 0.24
CDX4-201ENST00000373514 DOPEY2Q9Y3R5 2298 aa16.52■□□□□ 0.24
CDX4-201ENST00000373514 AKR7A3O95154 331 aa16.52■□□□□ 0.24
CDX4-201ENST00000373514 BMP5P22003 454 aa16.52■□□□□ 0.24
CDX4-201ENST00000373514 FKBP2P26885 142 aaKnown RBP16.52■□□□□ 0.24
CDX4-201ENST00000373514 SMSP52788 366 aa16.52■□□□□ 0.24
CDX4-201ENST00000373514 SMIM11AP58511 58 aa16.52■□□□□ 0.24
CDX4-201ENST00000373514 LSM11P83369 360 aaKnown RBP eCLIP16.52■□□□□ 0.24
CDX4-201ENST00000373514 LTBQ06643 244 aa16.52■□□□□ 0.24
CDX4-201ENST00000373514 CCDC103Q8IW40 242 aa16.52■□□□□ 0.24
CDX4-201ENST00000373514 ZNF808Q8N4W9 903 aaPredicted RBP16.52■□□□□ 0.24
CDX4-201ENST00000373514 GIPC3Q8TF64 312 aa16.52■□□□□ 0.24
CDX4-201ENST00000373514 MOGAT1Q96PD6 335 aa16.52■□□□□ 0.24
CDX4-201ENST00000373514 ALPK1Q96QP1 1244 aa16.52■□□□□ 0.24
CDX4-201ENST00000373514 TMEM43Q9BTV4 400 aa16.52■□□□□ 0.24
CDX4-201ENST00000373514 TAPBPLQ9BX59 468 aa16.52■□□□□ 0.24
CDX4-201ENST00000373514 SMPD3Q9NY59 655 aaPredicted RBP16.52■□□□□ 0.24
CDX4-201ENST00000373514 COQ3Q9NZJ6 369 aa16.52■□□□□ 0.24
CDX4-201ENST00000373514 RAB26Q9ULW5 256 aa16.52■□□□□ 0.24
CDX4-201ENST00000373514 TRAPPC4Q9Y296 219 aa16.52■□□□□ 0.24
CDX4-201ENST00000373514 LRRK2Q5S007 2527 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms