RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 RPS4XP62701 263 aaKnown RBP21.73■■□□□ 1.07
CDK9-201ENST00000373264 FNDC7Q5VTL7 733 aa21.73■■□□□ 1.07
CDK9-201ENST00000373264 KTI12Q96EK9 354 aaPredicted RBP21.73■■□□□ 1.07
CDK9-201ENST00000373264 GAL3ST4Q96RP7 486 aa21.73■■□□□ 1.07
CDK9-201ENST00000373264 MARVELD1Q9BSK0 173 aa21.73■■□□□ 1.07
CDK9-201ENST00000373264 ABCG5Q9H222 651 aa21.73■■□□□ 1.07
CDK9-201ENST00000373264 ANKRD61A6NGH8 418 aa21.73■■□□□ 1.07
CDK9-201ENST00000373264 RGS13O14921 159 aa21.73■■□□□ 1.07
CDK9-201ENST00000373264 GPANK1O95872 356 aa21.73■■□□□ 1.07
CDK9-201ENST00000373264 PTBP1P26599 531 aaKnown RBP eCLIP21.73■■□□□ 1.07
CDK9-201ENST00000373264 CD38P28907 300 aa21.73■■□□□ 1.07
CDK9-201ENST00000373264 SKP2Q13309 424 aa21.73■■□□□ 1.07
CDK9-201ENST00000373264 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.73■■□□□ 1.07
CDK9-201ENST00000373264 LINC01590Q5TEZ4 76 aa21.73■■□□□ 1.07
CDK9-201ENST00000373264 PRSS45Q7RTY3 260 aa21.73■■□□□ 1.07
CDK9-201ENST00000373264 GCDHQ92947 438 aaPredicted RBP21.73■■□□□ 1.07
CDK9-201ENST00000373264 RNF166Q96A37 237 aaPredicted RBP21.73■■□□□ 1.07
CDK9-201ENST00000373264 NMNAT2Q9BZQ4 307 aa21.73■■□□□ 1.07
CDK9-201ENST00000373264 BRD7Q9NPI1 651 aa21.73■■□□□ 1.07
CDK9-201ENST00000373264 FRYLO94915 3013 aa21.73■■□□□ 1.07
CDK9-201ENST00000373264 A0A1W2PR77 199 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 PIN1P1O15428 100 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 TRAPPC2P0DI81 140 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 TRAPPC2BP0DI82 140 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 EPXP11678 715 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 HPGDP15428 266 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 ARSBP15848 533 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 CD53P19397 219 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 EVI2BP34910 448 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 GBX2P52951 348 aaPredicted RBP21.72■■□□□ 1.07
CDK9-201ENST00000373264 DGCR2P98153 550 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 GGTLC2Q14390 218 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 CDK10Q15131 360 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 STPG1Q5TH74 334 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 ATG4DQ86TL0 474 aaPredicted RBP21.72■■□□□ 1.07
CDK9-201ENST00000373264 TPRA1Q86W33 373 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 PDE7BQ9NP56 450 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 KLHL21Q9UJP4 597 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 TRAV6A0A075B6T7 132 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 A0A1B0GTH9 108 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 RPP14O95059 124 aaKnown RBP21.72■■□□□ 1.07
CDK9-201ENST00000373264 HLA-DMAP28067 261 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 RBMS1P29558 406 aaKnown RBP21.72■■□□□ 1.07
CDK9-201ENST00000373264 TOMM34Q15785 309 aaPredicted RBP21.72■■□□□ 1.07
CDK9-201ENST00000373264 MS4A15Q8N5U1 240 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 GFI1Q99684 422 aa21.72■■□□□ 1.07
CDK9-201ENST00000373264 INMT-MINDY4F8WBC2 141 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 UTS2O95399 124 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 GUSBP08236 651 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 UBL4AP11441 157 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 EFR3AQ14156 821 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 TRAM1Q15629 374 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 ZNF74Q16587 644 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 C1QL3Q5VWW1 255 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 CMIPQ8IY22 773 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 POMGNT2Q8NAT1 580 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 CEP76Q8TAP6 659 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 TSPAN10Q9H1Z9 355 aaPredicted RBP21.71■■□□□ 1.07
CDK9-201ENST00000373264 SRA1Q9HD15 236 aaKnown RBP21.71■■□□□ 1.07
CDK9-201ENST00000373264 NOX4Q9NPH5 578 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 ANKRD10Q9NXR5 420 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 SLC6A1P30531 599 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 OR1D5P58170 312 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 SLC36A2Q495M3 483 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 LSM14AQ8ND56 463 aaKnown RBP21.71■■□□□ 1.07
CDK9-201ENST00000373264 FAM71CQ8NEG0 241 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 RGP1Q92546 391 aaPredicted RBP21.71■■□□□ 1.07
CDK9-201ENST00000373264 KCTD12Q96CX2 325 aaKnown RBP21.71■■□□□ 1.07
CDK9-201ENST00000373264 ALG12Q9BV10 488 aa21.71■■□□□ 1.07
CDK9-201ENST00000373264 ARID1BQ8NFD5 2236 aaPredicted RBP21.71■■□□□ 1.07
CDK9-201ENST00000373264 TVP23AA6NH52 213 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 ICOSLGO75144 302 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 AHCYP23526 432 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 PSMD4P55036 377 aaKnown RBP21.7■■□□□ 1.06
CDK9-201ENST00000373264 CLDN12P56749 244 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 SKP1P63208 163 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 ZP2Q05996 745 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 VWA2Q5GFL6 755 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 NANSQ9NR45 359 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 UBQLN4Q9NRR5 601 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 TMEM150CB9EJG8 249 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 CPNE3O75131 537 aaKnown RBP21.7■■□□□ 1.06
CDK9-201ENST00000373264 CTXN1P60606 82 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 ACTA2P62736 377 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 ACTG2P63267 376 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 PLA1AQ53H76 456 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 HES5Q5TA89 166 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 FAM122BQ7Z309 247 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 GKN2Q86XP6 184 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 SYS1Q8N2H4 156 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 LPAR4Q99677 370 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 FKRPQ9H9S5 495 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 CUTCQ9NTM9 273 aa21.7■■□□□ 1.06
CDK9-201ENST00000373264 ING1Q9UK53 422 aaPredicted RBP21.7■■□□□ 1.06
CDK9-201ENST00000373264 TMEM72A0PK05 275 aa21.69■■□□□ 1.06
CDK9-201ENST00000373264 KHNYNO15037 678 aaKnown RBP21.69■■□□□ 1.06
CDK9-201ENST00000373264 ARPC3O15145 178 aa21.69■■□□□ 1.06
CDK9-201ENST00000373264 FLRT2O43155 660 aa21.69■■□□□ 1.06
CDK9-201ENST00000373264 PPM1BO75688 479 aa21.69■■□□□ 1.06
CDK9-201ENST00000373264 OR8G3PP0DMU2 310 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms