RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 PTCHD1Q96NR3 888 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 OR2A7Q96R45 310 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 TSPAN10Q9H1Z9 355 aaPredicted RBP13.6□□□□□ -0.23
COL9A2-202ENST00000372748 PLEKHA1Q9HB21 404 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 GPN1Q9HCN4 374 aaPredicted RBP13.6□□□□□ -0.23
COL9A2-202ENST00000372748 SPTBN5Q9NRC6 3674 aaKnown RBP13.6□□□□□ -0.23
COL9A2-202ENST00000372748 ANKRD20A5PA0PJZ0 165 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 SELENOFO60613 162 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 PDGFRLQ15198 375 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 ARHGAP11BQ3KRB8 267 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 EIPR1Q53HC9 387 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 DCAF12L2Q5VW00 463 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 TANGO2Q6ICL3 276 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 VITQ6UXI7 678 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 GSG1LQ6UXU4 331 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 TMPRSS11FQ6ZWK6 438 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 MTSS1LQ765P7 747 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 RNF113BQ8IZP6 322 aaKnown RBP13.59□□□□□ -0.23
COL9A2-202ENST00000372748 LRRC25Q8N386 305 aaPredicted RBP13.59□□□□□ -0.23
COL9A2-202ENST00000372748 OR2L3Q8NG85 312 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 ZDHHC1Q8WTX9 485 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 S100A16Q96FQ6 103 aaKnown RBP13.59□□□□□ -0.23
COL9A2-202ENST00000372748 THAP10Q9P2Z0 257 aaPredicted RBP13.59□□□□□ -0.23
COL9A2-202ENST00000372748 OPN4Q9UHM6 478 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 FOXJ3Q9UPW0 622 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 MUC22E2RYF6 1773 aaPredicted RBP13.59□□□□□ -0.23
COL9A2-202ENST00000372748 NAP1L6A6NFF2 107 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 FAM171A2A8MVW0 826 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 ZNF879B4DU55 563 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 AIPO00170 330 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 PTP4A3O75365 173 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 B3GALNT1O75752 331 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 KAT7O95251 611 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 HIST1H2ABP04908 130 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 GJA4P35212 333 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 CBFBQ13951 182 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 ETFDHQ16134 617 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 CSRP2Q16527 193 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 GXYLT1Q4G148 440 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 OR7E24Q6IFN5 339 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 HIST3H2AQ7L7L0 130 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 OR6K6Q8NGW6 343 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 OR2L8Q8NGY9 312 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 HIST1H2ACQ93077 130 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 CNN2Q99439 309 aaKnown RBP13.59□□□□□ -0.23
COL9A2-202ENST00000372748 SLC6A17Q9H1V8 727 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 CERS4Q9HA82 394 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 TMEM74BQ9NUR3 256 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 OR5V1Q9UGF6 321 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 ADAM18Q9Y3Q7 739 aa13.59□□□□□ -0.23
COL9A2-202ENST00000372748 TBC1D3KA0A087X1G2 549 aa13.58□□□□□ -0.23
COL9A2-202ENST00000372748 A0A1B0GVT2 93 aa13.58□□□□□ -0.23
COL9A2-202ENST00000372748 TBC1D3FA6NER0 549 aaPredicted RBP13.58□□□□□ -0.23
COL9A2-202ENST00000372748 NDUFB6O95139 128 aa13.58□□□□□ -0.23
COL9A2-202ENST00000372748 NGFRP08138 427 aa13.58□□□□□ -0.23
COL9A2-202ENST00000372748 PPP2CBP62714 309 aa13.58□□□□□ -0.23
COL9A2-202ENST00000372748 PPP2CAP67775 309 aa13.58□□□□□ -0.23
COL9A2-202ENST00000372748 PLA2G7Q13093 441 aa13.58□□□□□ -0.23
COL9A2-202ENST00000372748 TBC1D3GQ6DHY5 549 aa13.58□□□□□ -0.23
COL9A2-202ENST00000372748 PWWP2BQ6NUJ5 590 aa13.58□□□□□ -0.23
COL9A2-202ENST00000372748 ZNF613Q6PF04 617 aa13.58□□□□□ -0.23
COL9A2-202ENST00000372748 RTL10Q7L3V2 364 aa13.58□□□□□ -0.23
COL9A2-202ENST00000372748 SLC35F2Q8IXU6 374 aa13.58□□□□□ -0.23
COL9A2-202ENST00000372748 OR4E2Q8NGC2 313 aa13.58□□□□□ -0.23
COL9A2-202ENST00000372748 ZCCHC10Q8TBK6 192 aa13.58□□□□□ -0.23
COL9A2-202ENST00000372748 TMEM106CQ9BVX2 250 aa13.58□□□□□ -0.23
COL9A2-202ENST00000372748 PHPT1Q9NRX4 125 aaPredicted RBP13.58□□□□□ -0.23
COL9A2-202ENST00000372748 OR6C65A6NJZ3 312 aa13.58□□□□□ -0.24
COL9A2-202ENST00000372748 GOSR2O14653 212 aa13.58□□□□□ -0.24
COL9A2-202ENST00000372748 SDC3O75056 442 aa13.58□□□□□ -0.24
COL9A2-202ENST00000372748 CBX7O95931 251 aa13.58□□□□□ -0.24
COL9A2-202ENST00000372748 RLN2P04090 185 aa13.58□□□□□ -0.24
COL9A2-202ENST00000372748 CEACAM5P06731 702 aa13.58□□□□□ -0.24
COL9A2-202ENST00000372748 SEC13P55735 322 aa13.58□□□□□ -0.24
COL9A2-202ENST00000372748 NANOS3P60323 173 aaKnown RBP13.58□□□□□ -0.24
COL9A2-202ENST00000372748 GK2Q14410 553 aaPredicted RBP13.58□□□□□ -0.24
COL9A2-202ENST00000372748 RPL13AP3Q6NVV1 102 aa13.58□□□□□ -0.24
COL9A2-202ENST00000372748 RPL22L1Q6P5R6 122 aaKnown RBP13.58□□□□□ -0.24
COL9A2-202ENST00000372748 PDZD9Q8IXQ8 264 aa13.58□□□□□ -0.24
COL9A2-202ENST00000372748 OR4D10Q8NGI6 311 aa13.58□□□□□ -0.24
COL9A2-202ENST00000372748 C10orf90Q96M02 699 aa13.58□□□□□ -0.24
COL9A2-202ENST00000372748 EXOSC3Q9NQT5 275 aaKnown RBP13.58□□□□□ -0.24
COL9A2-202ENST00000372748 HAO2Q9NYQ3 351 aa13.58□□□□□ -0.24
COL9A2-202ENST00000372748 VCANP13611 3396 aa13.58□□□□□ -0.24
COL9A2-202ENST00000372748 RNGTTO60942 597 aaKnown RBP13.57□□□□□ -0.24
COL9A2-202ENST00000372748 RPP14O95059 124 aaKnown RBP13.57□□□□□ -0.24
COL9A2-202ENST00000372748 ZNF888P0CJ79 500 aaPredicted RBP13.57□□□□□ -0.24
COL9A2-202ENST00000372748 NID1P14543 1247 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 SOX2P48431 317 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 ACTA2P62736 377 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 ACTG2P63267 376 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 PLAURQ03405 335 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 CEBPEQ15744 281 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 C2orf27AQ580R0 203 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 DCST2Q5T1A1 773 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 ZC3H14Q6PJT7 736 aaKnown RBP13.57□□□□□ -0.24
COL9A2-202ENST00000372748 TMEFF1Q8IYR6 380 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 TMPRSS13Q9BYE2 586 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 MED9Q9NWA0 146 aa13.57□□□□□ -0.24
COL9A2-202ENST00000372748 NCDNQ9UBB6 729 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms