RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 SP140LQ9H930 580 aa16.27■□□□□ 0.2
CTSA-204ENST00000372484 APMAPQ9HDC9 416 aa16.27■□□□□ 0.2
CTSA-204ENST00000372484 PCDHGB7Q9Y5F8 929 aa16.27■□□□□ 0.2
CTSA-204ENST00000372484 SHISA3A0PJX4 238 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 GP1BBP13224 206 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 F8A1P23610 371 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 UQCRC1P31930 480 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 CAPZA2P47755 286 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 EMP2P54851 167 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 E2F1Q01094 437 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 SLC3A1Q07837 685 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 SLC35D3Q5M8T2 416 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 RPTNQ6XPR3 784 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 FAM122BQ7Z309 247 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 NUP54Q7Z3B4 507 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 SLC35F2Q8IXU6 374 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 LRRC75AQ8NAA5 344 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 DRAXINQ8NBI3 349 aaPredicted RBP16.27■□□□□ 0.19
CTSA-204ENST00000372484 NFAM1Q8NET5 270 aaPredicted RBP16.27■□□□□ 0.19
CTSA-204ENST00000372484 C14orf119Q9NWQ9 140 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 TRAPPC4Q9Y296 219 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 SLC6A5Q9Y345 797 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 NPFFR2Q9Y5X5 522 aa16.27■□□□□ 0.19
CTSA-204ENST00000372484 DVL2O14641 736 aa16.26■□□□□ 0.19
CTSA-204ENST00000372484 SLC25A12O75746 678 aa16.26■□□□□ 0.19
CTSA-204ENST00000372484 APEHP13798 732 aaKnown RBP16.26■□□□□ 0.19
CTSA-204ENST00000372484 SDHAP31040 664 aa16.26■□□□□ 0.19
CTSA-204ENST00000372484 CDKN2AP42771 156 aaKnown RBP16.26■□□□□ 0.19
CTSA-204ENST00000372484 P2RX1P51575 399 aa16.26■□□□□ 0.19
CTSA-204ENST00000372484 ACTA2P62736 377 aa16.26■□□□□ 0.19
CTSA-204ENST00000372484 ACTG2P63267 376 aa16.26■□□□□ 0.19
CTSA-204ENST00000372484 RPL18Q07020 188 aaKnown RBP16.26■□□□□ 0.19
CTSA-204ENST00000372484 SIGLEC14Q08ET2 396 aa16.26■□□□□ 0.19
CTSA-204ENST00000372484 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.26■□□□□ 0.19
CTSA-204ENST00000372484 PEAR1Q5VY43 1037 aaPredicted RBP16.26■□□□□ 0.19
CTSA-204ENST00000372484 OR8H2Q8N162 312 aa16.26■□□□□ 0.19
CTSA-204ENST00000372484 NLGN4YQ8NFZ3 816 aaPredicted RBP16.26■□□□□ 0.19
CTSA-204ENST00000372484 OR5J2Q8NH18 312 aa16.26■□□□□ 0.19
CTSA-204ENST00000372484 GFM1Q96RP9 751 aaKnown RBP16.26■□□□□ 0.19
CTSA-204ENST00000372484 MIXL1Q9H2W2 232 aa16.26■□□□□ 0.19
CTSA-204ENST00000372484 FKRPQ9H9S5 495 aa16.26■□□□□ 0.19
CTSA-204ENST00000372484 OCIAD1Q9NX40 245 aa16.26■□□□□ 0.19
CTSA-204ENST00000372484 DMDP11532 3685 aa16.26■□□□□ 0.19
CTSA-204ENST00000372484 NCR1O76036 304 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 CD53P19397 219 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 DEFA1P59665 94 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 DEFA3P59666 94 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 TP53I3Q53FA7 332 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 ZMAT1Q5H9K5 638 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 ZNF385CQ66K41 422 aaPredicted RBP16.25■□□□□ 0.19
CTSA-204ENST00000372484 PAPD4Q6PIY7 484 aaKnown RBP16.25■□□□□ 0.19
CTSA-204ENST00000372484 GALNT6Q8NCL4 622 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 LSM14AQ8ND56 463 aaKnown RBP16.25■□□□□ 0.19
CTSA-204ENST00000372484 DUSP19Q8WTR2 217 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 HTRA1Q92743 480 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 DNAJA3Q96EY1 480 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 DIRAS2Q96HU8 199 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 MARCH7Q9H992 704 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 RPRD1BQ9NQG5 326 aaKnown RBP16.25■□□□□ 0.19
CTSA-204ENST00000372484 GRHPRQ9UBQ7 328 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 EXPH5Q8NEV8 1989 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 C4orf47A7E2U8 309 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 SELENOFO60613 162 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 ACVR1BP36896 505 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 IL10RAQ13651 578 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 QPRTQ15274 297 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 TRAM1Q15629 374 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 ZNF79Q15937 498 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 FAM131AQ6UXB0 335 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 SNX33Q8WV41 574 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 CTRCQ99895 268 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 NDEL1Q9GZM8 345 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 COMMD3Q9UBI1 195 aa16.25■□□□□ 0.19
CTSA-204ENST00000372484 TRAV36DV7A0A075B6V5 113 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 VSTM2BA6NLU5 285 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 MAGEB4O15481 346 aaPredicted RBP16.24■□□□□ 0.19
CTSA-204ENST00000372484 GLCEO94923 617 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 PTTG1O95997 202 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 SLC26A5P58743 744 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 CDC20Q12834 499 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 EFR3AQ14156 821 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 TRIM61Q5EBN2 209 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 C1QL3Q5VWW1 255 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 NUBPLQ8TB37 319 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 ZC3H10Q96K80 434 aaKnown RBP16.24■□□□□ 0.19
CTSA-204ENST00000372484 CPNE5Q9HCH3 593 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 GRIP1Q9Y3R0 1128 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 TRBV11-1A0A0K0K1C0 115 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 FABP12A6NFH5 140 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 FAM171A2A8MVW0 826 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 WISP1O95388 367 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 CER1O95813 267 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 DLGAP3O95886 979 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 AZGP1P25311 298 aaKnown RBP16.24■□□□□ 0.19
CTSA-204ENST00000372484 POLR2HP52434 150 aaKnown RBP16.24■□□□□ 0.19
CTSA-204ENST00000372484 FBXW4P57775 412 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 KRR1Q13601 381 aaKnown RBP16.24■□□□□ 0.19
CTSA-204ENST00000372484 DMKNQ6E0U4 476 aaPredicted RBP16.24■□□□□ 0.19
CTSA-204ENST00000372484 LCN10Q6JVE6 187 aa16.24■□□□□ 0.19
CTSA-204ENST00000372484 LYPD4Q6UWN0 246 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms