RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 LCN6P62502 163 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ST3GAL3Q11203 375 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 SQSTM1Q13501 440 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 CBFBQ13951 182 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 GK2Q14410 553 aaPredicted RBP4.97□□□□□ -1.61
ATG4A-204ENST00000372246 NNATQ16517 81 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 HSD17B12Q53GQ0 312 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 TRMT12Q53H54 448 aaKnown RBP4.97□□□□□ -1.61
ATG4A-204ENST00000372246 TCEAL5Q5H9L2 206 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 FAM209BQ5JX69 171 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 OR4C11Q6IEV9 310 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 CDC73Q6P1J9 531 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF836Q6ZNA1 936 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ADIPOR2Q86V24 386 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 C17orf64Q86WR6 236 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 LDLRAD3Q86YD5 345 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 PDZD9Q8IXQ8 264 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 TEX19Q8NA77 164 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 NUP43Q8NFH3 380 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 OR7G2Q8NG99 324 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 OR52E2Q8NGJ4 325 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 OR51S1Q8NGJ8 323 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 OR1S2Q8NGQ3 325 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 OR6K6Q8NGW6 343 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 FIBINQ8TAL6 211 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ACOT11Q8WXI4 607 aaPredicted RBP4.97□□□□□ -1.61
ATG4A-204ENST00000372246 AHCYL2Q96HN2 611 aaKnown RBP4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ARL5BQ96KC2 179 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 Q96M85 177 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 MS4A4EQ96PG1 132 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 SPATA5L1Q9BVQ7 753 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 NKX6-2Q9C056 277 aaPredicted RBP4.97□□□□□ -1.61
ATG4A-204ENST00000372246 MFFQ9GZY8 342 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 TMEM185BQ9H7F4 350 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 MEPEQ9NQ76 525 aaPredicted RBP4.97□□□□□ -1.61
ATG4A-204ENST00000372246 MRPL17Q9NRX2 175 aaKnown RBP4.97□□□□□ -1.61
ATG4A-204ENST00000372246 PRR13Q9NZ81 148 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 OR5V1Q9UGF6 321 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 MLXQ9UH92 298 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 OPN4Q9UHM6 478 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 KIF25Q9UIL4 384 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ABT1Q9ULW3 272 aaKnown RBP4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ENTPD4Q9Y227 616 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF337Q9Y3M9 751 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF175Q9Y473 711 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ASB4Q9Y574 426 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 OR1A2Q9Y585 309 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 SESN1Q9Y6P5 492 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 STON1Q9Y6Q2 735 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 COL6A3P12111 3177 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 FRYQ5TBA9 3013 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 DENND4CQ5VZ89 1909 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 TRAV8-7A0A075B6U6 113 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 TRAV14DV4A0A0A6YYC5 116 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 CPED1A4D0V7 1026 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 UNC119BA6NIH7 251 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 CCL16O15467 120 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 KLF4O43474 513 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 SNRNP200O75643 2136 aaKnown RBP4.97□□□□□ -1.61
ATG4A-204ENST00000372246 SLC25A12O75746 678 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 SC5DO75845 299 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 HPP00738 406 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 FGBP02675 491 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 HIST1H2ABP04908 130 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 SPP1P10451 314 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 TYRP14679 529 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 HPGDP15428 266 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 UGT2B7P16662 529 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ADRA2CP18825 462 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 GSTM3P21266 225 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 FPR3P25089 353 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 MAT2AP31153 395 aaKnown RBP4.97□□□□□ -1.61
ATG4A-204ENST00000372246 BCL6P41182 706 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 GPR1P46091 355 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 NPBWR1P48145 328 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF136P52737 540 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 NTHL1P78549 312 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ACY1Q03154 408 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 PLAURQ03405 335 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 RBM39Q14498 530 aaKnown RBP4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF124Q15973 351 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 PCGF3Q3KNV8 242 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 MANEAQ5SRI9 462 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 LY6G5CQ5SRR4 150 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 TMEM69Q5SWH9 247 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 DMKNQ6E0U4 476 aaPredicted RBP4.97□□□□□ -1.61
ATG4A-204ENST00000372246 HIST3H2AQ7L7L0 130 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 TMEM200AQ86VY9 491 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF565Q8N9K5 539 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 BHLHE23Q8NDY6 225 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 OR4C16Q8NGL9 310 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 SCARB1Q8WTV0 552 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 TFGQ92734 400 aaPredicted RBP4.97□□□□□ -1.61
ATG4A-204ENST00000372246 OSTF1Q92882 214 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 HIST1H2ACQ93077 130 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 NMNAT3Q96T66 252 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 CRB3Q9BUF7 120 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 NEUROD4Q9HD90 331 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ISYNA1Q9NPH2 558 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ASF1BQ9NVP2 202 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms