RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 SLC17A5Q9NRA2 495 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 NPAP1Q9NZP6 1156 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.6■□□□□ 0.25
TMEM53-201ENST00000372235 TESQ9UGI8 421 aaKnown RBP16.6■□□□□ 0.25
TMEM53-201ENST00000372235 LEF1Q9UJU2 399 aaPredicted RBP16.6■□□□□ 0.25
TMEM53-201ENST00000372235 TRIM64A6NGJ6 449 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 TRIM64BA6NI03 449 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 M0R1B8 84 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 AKAP8O43823 692 aaKnown RBP16.59■□□□□ 0.25
TMEM53-201ENST00000372235 LY6G6DO95868 133 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 NUDT7P0C024 238 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 PRG2P13727 222 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 HOXB1P14653 301 aaPredicted RBP16.59■□□□□ 0.25
TMEM53-201ENST00000372235 ZNF83P51522 516 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 SH3BGRP55822 239 aaPredicted RBP16.59■□□□□ 0.25
TMEM53-201ENST00000372235 BNIP2Q12982 314 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 VEZF1Q14119 521 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 TTMPQ5BVD1 217 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 ULK3Q6PHR2 472 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 CREB3L2Q70SY1 520 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 SLC30A8Q8IWU4 369 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 NFKBIDQ8NI38 313 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 EPYCQ99645 322 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 TMEM27Q9HBJ8 222 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 CBLN4Q9NTU7 201 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 SLC25A37Q9NYZ2 338 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 VAPAQ9P0L0 249 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 RCE1Q9Y256 329 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 ANGPT4Q9Y264 503 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 B3GALT5Q9Y2C3 310 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 CHST2Q9Y4C5 530 aa16.59■□□□□ 0.25
TMEM53-201ENST00000372235 ZFHX3Q15911 3703 aa16.58■□□□□ 0.25
TMEM53-201ENST00000372235 MTORP42345 2549 aa16.58■□□□□ 0.25
TMEM53-201ENST00000372235 ZNF43P17038 809 aa16.58■□□□□ 0.24
TMEM53-201ENST00000372235 TTKP33981 857 aa16.58■□□□□ 0.24
TMEM53-201ENST00000372235 DSCR9P59020 149 aa16.58■□□□□ 0.24
TMEM53-201ENST00000372235 RBBP4Q09028 425 aa16.58■□□□□ 0.24
TMEM53-201ENST00000372235 SCARB2Q14108 478 aa16.58■□□□□ 0.24
TMEM53-201ENST00000372235 ALG10BQ5I7T1 473 aa16.58■□□□□ 0.24
TMEM53-201ENST00000372235 FAM69AQ5T7M9 428 aa16.58■□□□□ 0.24
TMEM53-201ENST00000372235 METTL21CQ5VZV1 264 aa16.58■□□□□ 0.24
TMEM53-201ENST00000372235 RANBP3LQ86VV4 465 aaPredicted RBP16.58■□□□□ 0.24
TMEM53-201ENST00000372235 CIARTQ8N365 385 aaPredicted RBP16.58■□□□□ 0.24
TMEM53-201ENST00000372235 ZIC4Q8N9L1 334 aa16.58■□□□□ 0.24
TMEM53-201ENST00000372235 HIPK4Q8NE63 616 aa16.58■□□□□ 0.24
TMEM53-201ENST00000372235 OR6S1Q8NH40 331 aa16.58■□□□□ 0.24
TMEM53-201ENST00000372235 CKAP2Q8WWK9 683 aa16.58■□□□□ 0.24
TMEM53-201ENST00000372235 SLC47A1Q96FL8 570 aa16.58■□□□□ 0.24
TMEM53-201ENST00000372235 LINC00470Q9BZP3 86 aa16.58■□□□□ 0.24
TMEM53-201ENST00000372235 NDUFAF1Q9Y375 327 aa16.58■□□□□ 0.24
TMEM53-201ENST00000372235 AIM2O14862 343 aa16.57■□□□□ 0.24
TMEM53-201ENST00000372235 ANGPT2O15123 496 aa16.57■□□□□ 0.24
TMEM53-201ENST00000372235 UBE2NP61088 152 aaKnown RBP16.57■□□□□ 0.24
TMEM53-201ENST00000372235 CHRNB3Q05901 458 aa16.57■□□□□ 0.24
TMEM53-201ENST00000372235 PAGE3Q5JUK9 113 aa16.57■□□□□ 0.24
TMEM53-201ENST00000372235 SWT1Q5T5J6 900 aaKnown RBP16.57■□□□□ 0.24
TMEM53-201ENST00000372235 MUC15Q8N387 334 aa16.57■□□□□ 0.24
TMEM53-201ENST00000372235 WDR31Q8NA23 367 aa16.57■□□□□ 0.24
TMEM53-201ENST00000372235 C11orf65Q8NCR3 313 aa16.57■□□□□ 0.24
TMEM53-201ENST00000372235 MAGEE2Q8TD90 523 aaPredicted RBP16.57■□□□□ 0.24
TMEM53-201ENST00000372235 NEUROG1Q92886 237 aa16.57■□□□□ 0.24
TMEM53-201ENST00000372235 SLC25A36Q96CQ1 311 aa16.57■□□□□ 0.24
TMEM53-201ENST00000372235 OXGR1Q96P68 337 aa16.57■□□□□ 0.24
TMEM53-201ENST00000372235 ZNF385AQ96PM9 386 aaKnown RBP16.57■□□□□ 0.24
TMEM53-201ENST00000372235 KCNS3Q9BQ31 491 aa16.57■□□□□ 0.24
TMEM53-201ENST00000372235 SLC52A3Q9NQ40 469 aa16.57■□□□□ 0.24
TMEM53-201ENST00000372235 CORINQ9Y5Q5 1042 aa16.57■□□□□ 0.24
TMEM53-201ENST00000372235 VPS13CQ709C8 3753 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 FLNAP21333 2647 aaKnown RBP16.56■□□□□ 0.24
TMEM53-201ENST00000372235 TRAV36DV7A0A075B6V5 113 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 TRBV5-3A0A0A0MS03 114 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 LOC102725191A0A1B0GVB3 256 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 FTCDNL1E5RQL4 147 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 FZD7O75084 574 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 CDKN1AP38936 164 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 RPS5P46782 204 aaKnown RBP16.56■□□□□ 0.24
TMEM53-201ENST00000372235 FABP6P51161 128 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 P2RY4P51582 365 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 TNK1Q13470 666 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 C1DQ13901 141 aaKnown RBP16.56■□□□□ 0.24
TMEM53-201ENST00000372235 C3orf36Q3SXR2 165 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 HMBOX1Q6NT76 420 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 NIPAL3Q6P499 406 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 Q71RC1 249 aaPredicted RBP16.56■□□□□ 0.24
TMEM53-201ENST00000372235 ARMC8Q8IUR7 673 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 MSRB3Q8IXL7 192 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 DPP10Q8N608 796 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 ADPRHL1Q8NDY3 354 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 SLAMF8Q9P0V8 285 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 FBXO9Q9UK97 447 aaPredicted RBP16.56■□□□□ 0.24
TMEM53-201ENST00000372235 PMF1-BGLAPU3KQ54 211 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 ACANP16112 2415 aa16.56■□□□□ 0.24
TMEM53-201ENST00000372235 SLC43A1O75387 559 aa16.55■□□□□ 0.24
TMEM53-201ENST00000372235 CD8AP01732 235 aa16.55■□□□□ 0.24
TMEM53-201ENST00000372235 TP53P04637 393 aaPredicted RBP16.55■□□□□ 0.24
TMEM53-201ENST00000372235 C8BP07358 591 aa16.55■□□□□ 0.24
TMEM53-201ENST00000372235 APOBEC3AP31941 199 aaPredicted RBP16.55■□□□□ 0.24
TMEM53-201ENST00000372235 RGS8P57771 180 aaPredicted RBP16.55■□□□□ 0.24
TMEM53-201ENST00000372235 RAB35Q15286 201 aa16.55■□□□□ 0.24
TMEM53-201ENST00000372235 RUNDC3AQ59EK9 446 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms