RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CENPXA8MT69 81 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 J3KTA2 159 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 AP3D1O14617 1153 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 RGS5O15539 181 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 PRKYO43930 277 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 HCN1O60741 890 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 PRKRAO75569 313 aaKnown RBP9.44□□□□□ -0.9
COL5A1-202ENST00000371820 GBAP04062 536 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 HLA-DPB1P04440 258 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 AGAP20933 346 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 CNR1P21554 472 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 NT5EP21589 574 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 PTGS2P35354 604 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 CRYBB2P43320 205 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 RNF144AP50876 292 aaPredicted RBP9.44□□□□□ -0.9
COL5A1-202ENST00000371820 TPTEP56180 551 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 NRG3P56975 720 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 EFNB1P98172 346 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 BDH1Q02338 343 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 ZNF91Q05481 1191 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 TAB1Q15750 504 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 MAPK11Q15759 364 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 KCNJ8Q15842 424 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 C3AR1Q16581 482 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 DECR1Q16698 335 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 ZSWIM7Q19AV6 140 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 HACD4Q5VWC8 232 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 RPL13AP3Q6NVV1 102 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 SLC48A1Q6P1K1 146 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 ARHGAP11AQ6P4F7 1023 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 DEF8Q6ZN54 512 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 C16orf47Q6ZP98 133 aaPredicted RBP9.44□□□□□ -0.9
COL5A1-202ENST00000371820 GDPD3Q7L5L3 318 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 MDGA2Q7Z553 956 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 MRGPRGQ86SM5 289 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 ZBTB46Q86UZ6 589 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 C9orf40Q8IXQ3 194 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 RNF113BQ8IZP6 322 aaKnown RBP9.44□□□□□ -0.9
COL5A1-202ENST00000371820 TCEANCQ8N8B7 351 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 ZNF321PQ8N8H1 164 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 IL17RDQ8NFM7 739 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 OR2M7Q8NG81 312 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 OR7G1Q8NGA0 311 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 PIGXQ8TBF5 258 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 TMEM163Q8TC26 289 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 SLC25A46Q96AG3 418 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 SPACA9Q96E40 222 aaPredicted RBP9.44□□□□□ -0.9
COL5A1-202ENST00000371820 OR5M11Q96RB7 305 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 TREX2Q9BQ50 279 aaPredicted RBP9.44□□□□□ -0.9
COL5A1-202ENST00000371820 JAM3Q9BX67 310 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 WWTR1Q9GZV5 400 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 HOXD1Q9GZZ0 328 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 OR51I1Q9H343 314 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 MTHFD2LQ9H903 347 aaPredicted RBP9.44□□□□□ -0.9
COL5A1-202ENST00000371820 ANKRA2Q9H9E1 313 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 HHATLQ9HCP6 504 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 SIRT3Q9NTG7 399 aaPredicted RBP9.44□□□□□ -0.9
COL5A1-202ENST00000371820 ZCCHC3Q9NUD5 404 aaKnown RBP9.44□□□□□ -0.9
COL5A1-202ENST00000371820 ASB6Q9NWX5 421 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 TVP23BQ9NYZ1 205 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 CNIH4Q9P003 139 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 TESQ9UGI8 421 aaKnown RBP9.44□□□□□ -0.9
COL5A1-202ENST00000371820 BOKQ9UMX3 212 aaPredicted RBP9.44□□□□□ -0.9
COL5A1-202ENST00000371820 A4GNTQ9UNA3 340 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 TRBV4-1A0A0J9YWV2 114 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 C2orf92A0A1B0GVN3 265 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 TRDV1A0A1B0GX56 115 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 CCDC182A6NF36 153 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 FABP12A6NFH5 140 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 FAM25AB3EWG3 89 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 FAM25CB3EWG5 89 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 FAM25GB3EWG6 89 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 TP53I11O14683 189 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 FFAR1O14842 300 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 RGS13O14921 159 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 TLX2O43763 284 aaPredicted RBP9.43□□□□□ -0.9
COL5A1-202ENST00000371820 CDC40O60508 579 aaKnown RBP eCLIP9.43□□□□□ -0.9
COL5A1-202ENST00000371820 TMEM127O75204 238 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 GPX5O75715 221 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 CYP7B1O75881 506 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 SNAPC5O75971 98 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 OR12D1P0DN82 309 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 CPMP14384 443 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 TNFRSF1BP20333 461 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 PRKAR1BP31321 381 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 GABRA5P31644 462 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 PTGER4P35408 488 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 RPS19P39019 145 aaKnown RBP9.43□□□□□ -0.9
COL5A1-202ENST00000371820 DDOSTP39656 456 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 CASP3P42574 277 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 SLC37A1P57057 533 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 PPIAP62937 165 aaKnown RBP9.43□□□□□ -0.9
COL5A1-202ENST00000371820 PSPHP78330 225 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 FUT7Q11130 342 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 ASAH1Q13510 395 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 LARS2Q15031 903 aaKnown RBP9.43□□□□□ -0.9
COL5A1-202ENST00000371820 EBPQ15125 230 aaKnown RBP9.43□□□□□ -0.9
COL5A1-202ENST00000371820 ZNF750Q32MQ0 723 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 EIPR1Q53HC9 387 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 ZNF311Q5JNZ3 666 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms