RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 CXCL16Q9H2A7 254 aa11.82□□□□□ -0.52
GPC4-201ENST00000370828 WNT6Q9Y6F9 365 aa11.82□□□□□ -0.52
GPC4-201ENST00000370828 SLC22A23A1A5C7 686 aa11.82□□□□□ -0.52
GPC4-201ENST00000370828 HTR1FP30939 366 aa11.82□□□□□ -0.52
GPC4-201ENST00000370828 CD80P33681 288 aa11.82□□□□□ -0.52
GPC4-201ENST00000370828 OR6T1Q8NGN1 323 aa11.82□□□□□ -0.52
GPC4-201ENST00000370828 CXorf36Q9H7Y0 433 aa11.82□□□□□ -0.52
GPC4-201ENST00000370828 ZNF587BE7ETH6 402 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 ZNF623O75123 536 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 LGI1O95970 557 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 CR2P20023 1033 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 CTSOP43234 321 aaPredicted RBP11.81□□□□□ -0.52
GPC4-201ENST00000370828 XCR1P46094 333 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 PLA2G7Q13093 441 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 TUSC1Q2TAM9 212 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 SAPCD1Q5SSQ6 148 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 FAHD1Q6P587 224 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 SLC30A7Q8NEW0 376 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 OR13C9Q8NGT0 318 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 FOXN4Q96NZ1 517 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 PITX2Q99697 317 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 GPR174Q9BXC1 333 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 SEMA4CQ9C0C4 833 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 SLC25A32Q9H2D1 315 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 SLC22A11Q9NSA0 550 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 MBD1Q9UIS9 605 aaPredicted RBP11.81□□□□□ -0.52
GPC4-201ENST00000370828 POMT2Q9UKY4 750 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 NPFFR2Q9Y5X5 522 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 K7ERU9 68 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 GPRIN2O60269 458 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 DNAJB6O75190 326 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 RDH16O75452 317 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 RAD51DO75771 328 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 ETV3LQ6ZN32 361 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 OR6N1Q8NGY5 312 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 ZNF461Q8TAF7 563 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 ZNF596Q8TC21 504 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 C1QTNF6Q9BXI9 259 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 ZNF840PA6NDX5 716 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 H3BQ06 376 aaPredicted RBP11.81□□□□□ -0.52
GPC4-201ENST00000370828 HRO43593 1189 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 CBX7O95931 251 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 IFNGR1P15260 489 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 NME1P15531 152 aaKnown RBP11.81□□□□□ -0.52
GPC4-201ENST00000370828 ASPGQ86U10 573 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 SLC43A2Q8N370 569 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 OR5AR1Q8NGP9 310 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 FAM213BQ8TBF2 198 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 SFXN5Q8TD22 340 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 CDS1Q92903 461 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 SLC35A3Q9Y2D2 325 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 SIGLEC6O43699 453 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 IL1RNP18510 177 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 SEC13P55735 322 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 CRMP1Q14194 572 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 LY6G5CQ5SRR4 150 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 LAS2Q8IYD9 372 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 KCNRGQ8N5I3 272 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 KREMEN2Q8NCW0 462 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 YIPF5Q969M3 257 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 LINC00052Q96N35 136 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 GPR62Q9BZJ7 368 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.81□□□□□ -0.52
GPC4-201ENST00000370828 SIRT5Q9NXA8 310 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 RHBDD3Q9Y3P4 386 aa11.81□□□□□ -0.52
GPC4-201ENST00000370828 N4BP2Q86UW6 1770 aaPredicted RBP11.81□□□□□ -0.52
GPC4-201ENST00000370828 ASPDHA6ND91 283 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 OR13C7P0DN81 318 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 ZNF28P17035 718 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 CNR1P21554 472 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 PTAFRP25105 342 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 SEMA3BQ13214 749 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 TMEM35AQ53FP2 167 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 OTUD1Q5VV17 481 aaPredicted RBP11.8□□□□□ -0.52
GPC4-201ENST00000370828 TPGS2Q68CL5 300 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 PET117Q6UWS5 81 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 MEX3BQ6ZN04 569 aaKnown RBP11.8□□□□□ -0.52
GPC4-201ENST00000370828 ADGRG3Q86Y34 549 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 CHST14Q8NCH0 376 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 HMGCLL1Q8TB92 370 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 CPNE4Q96A23 557 aaPredicted RBP11.8□□□□□ -0.52
GPC4-201ENST00000370828 PDCD1LG2Q9BQ51 273 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 FAM212BQ9NTI7 297 aaPredicted RBP11.8□□□□□ -0.52
GPC4-201ENST00000370828 GNG13Q9P2W3 67 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 NINQ8N4C6 2090 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 NWD2Q9ULI1 1742 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 CCDC163A0A0D9SF12 145 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 APODP05090 189 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 SERPINA5P05154 406 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 ZNF44P15621 663 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 AKR1C3P42330 323 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 POU3F4P49335 361 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 RBP2P50120 134 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 SMAD4Q13485 552 aaKnown RBP11.8□□□□□ -0.52
GPC4-201ENST00000370828 PRICKLE2Q7Z3G6 844 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 OR51D1Q8NGF3 324 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 TEPSINQ96N21 525 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 MED17Q9NVC6 651 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 RGPD1P0DJD0 1748 aa11.8□□□□□ -0.52
GPC4-201ENST00000370828 ZC3H12DA2A288 527 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms