RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 XKR7Q5GH72 579 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 PAGE3Q5JUK9 113 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 SLC35D3Q5M8T2 416 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 LIPJQ5W064 366 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 RBMS3Q6XE24 437 aaKnown RBP6.29□□□□□ -1.4
CSDE1-204ENST00000369530 AHSA2Q719I0 299 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 SSX9Q7RTT3 188 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 ADCK2Q7Z695 626 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 HS3ST5Q8IZT8 346 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 ZNF441Q8N8Z8 693 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 OR14A16Q8NHC5 309 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 RNASE11Q8TAA1 199 aaKnown RBP6.29□□□□□ -1.4
CSDE1-204ENST00000369530 MALSU1Q96EH3 234 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 IMMP1LQ96LU5 166 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 TEFMQ96QE5 360 aaKnown RBP6.29□□□□□ -1.4
CSDE1-204ENST00000369530 DMRTA2Q96SC8 542 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 CHCHD6Q9BRQ6 235 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 ENKD1Q9H0I2 346 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 OR51J1Q9H342 316 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 TMPRSS5Q9H3S3 457 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 DUSP22Q9NRW4 184 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 C21orf140B9A014 251 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 TEX46H3BTG2 121 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 CATP04040 527 aaKnown RBP6.29□□□□□ -1.4
CSDE1-204ENST00000369530 DRD2P14416 443 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 GABRA1P14867 456 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 RHCEP18577 417 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 PRPH2P23942 346 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 CRABP1P29762 137 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 EVX1P49640 407 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 XKP51811 444 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 ZP1P60852 638 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 KIR2DS3Q14952 304 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 TMEM255AQ5JRV8 349 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 YOD1Q5VVQ6 348 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-204ENST00000369530 RD3Q7Z3Z2 195 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 TRIM46Q7Z4K8 759 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 TMEM17Q86X19 198 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 ANGPTL5Q86XS5 388 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 FAM86B1Q8N7N1 296 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 MIB2Q96AX9 1013 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 R3HDM4Q96D70 268 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 PKP4Q99569 1192 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 DPH2Q9BQC3 489 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-204ENST00000369530 ISYNA1Q9NPH2 558 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 NPDC1Q9NQX5 325 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-204ENST00000369530 VNN3Q9NY84 501 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 NLKQ9UBE8 527 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 ZNF451Q9Y4E5 1061 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 CFAP20Q9Y6A4 193 aaKnown RBP6.29□□□□□ -1.4
CSDE1-204ENST00000369530 A0A1B0GW55 424 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 OR6C74A6NCV1 312 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 RGS14O43566 566 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 OR2A4O95047 310 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 CRYBA1P05813 215 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 DUX4L2P0CJ85 424 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 DUX4L3P0CJ86 424 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 DUX4L4P0CJ87 422 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 DUX4L5P0CJ88 424 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 DUX4L6P0CJ89 424 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 DUX4L7P0CJ90 424 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 PEPDP12955 493 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 CXCL2P19875 107 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 FPR1P21462 350 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 MST1P26927 711 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 MECP2P51608 486 aaKnown RBP6.29□□□□□ -1.4
CSDE1-204ENST00000369530 XKR6Q5GH73 641 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 MRM1Q6IN84 353 aaKnown RBP6.29□□□□□ -1.4
CSDE1-204ENST00000369530 C16orf54Q6UWD8 224 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 MOB3CQ70IA8 216 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 AMZ2Q86W34 360 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 PDZD9Q8IXQ8 264 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 SVBPQ8N300 66 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 ZNF454Q8N9F8 522 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 OR2L3Q8NG85 312 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 OR4A15Q8NGL6 344 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 ZNF480Q8WV37 535 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 AP3S1Q92572 193 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 OR2A7Q96R45 310 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 DUX4Q9UBX2 424 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 OARD1Q9Y530 152 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 LRBAP50851 2863 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 TRBV5-3A0A0A0MS03 114 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 TCRBV16S1A1N1A0A5B0 115 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 OR2M5A3KFT3 312 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 FAM220BPB1ANY3 271 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 NPIPB9F8W1W9 429 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 LGALS8O00214 317 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 LCMT2O60294 686 aaKnown RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 TPST2O60704 377 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 ALPPL2P10696 532 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 SLC2A2P11168 524 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 RCC1P18754 421 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 ITGA3P26006 1051 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 NUTF2P61970 127 aaKnown RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 CHIT1Q13231 466 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 ALKBH1Q13686 389 aaKnown RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 COL9A2Q14055 689 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-204ENST00000369530 ENPP6Q6UWR7 440 aa6.28□□□□□ -1.4
CSDE1-204ENST00000369530 ZNF730Q6ZMV8 503 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms