RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 CD300LGQ6UXG3 332 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 NUDT10Q8NFP7 164 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 TSTD1Q8NFU3 115 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 FAM213BQ8TBF2 198 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 FAHD2AQ96GK7 314 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 CASD1Q96PB1 797 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 SGPP1Q9BX95 441 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 MCOLN1Q9GZU1 580 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 VPS29Q9UBQ0 182 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 BACE2Q9Y5Z0 518 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 OR52A4PA6NMU1 304 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 CATP04040 527 aaKnown RBP9.7□□□□□ -0.86
PRDM1-201ENST00000369089 DBIP07108 87 aaKnown RBP9.7□□□□□ -0.86
PRDM1-201ENST00000369089 MRPL3P09001 348 aaKnown RBP9.7□□□□□ -0.86
PRDM1-201ENST00000369089 CDK2P24941 298 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 CRYBB2P43320 205 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 CRISP3P54108 245 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 UBE2V2Q15819 145 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 ARSJQ5FYB0 599 aaPredicted RBP9.7□□□□□ -0.86
PRDM1-201ENST00000369089 VHLLQ6RSH7 139 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 RNF44Q7L0R7 432 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 CPEB3Q8NE35 698 aaKnown RBP9.7□□□□□ -0.86
PRDM1-201ENST00000369089 OR9K2Q8NGE7 335 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 OR5L1Q8NGL2 311 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 LGALS14Q8TCE9 139 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 PPP1R14AQ96A00 147 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 HIST1H2BAQ96A08 127 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 LYSMD1Q96S90 227 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 CPPED1Q9BRF8 314 aaPredicted RBP9.7□□□□□ -0.86
PRDM1-201ENST00000369089 FOXJ2Q9P0K8 574 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 SLC35A3Q9Y2D2 325 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 GON4LQ3T8J9 2241 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 PKD1L3Q7Z443 1732 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 LOC730098B7Z3J9 87 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 PRSS23O95084 383 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 CD37P11049 281 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 AKT2P31751 481 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 SOX2P48431 317 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 MMP15P51511 669 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 LILRA4P59901 499 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 ELAVL1Q15717 326 aaKnown RBP9.7□□□□□ -0.86
PRDM1-201ENST00000369089 GXYLT1Q4G148 440 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 C1orf220Q5T0J3 134 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 GPR157Q5UAW9 335 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 OR56B2PQ8NGI1 322 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 C16orf58Q96GQ5 468 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 PDLIM5Q96HC4 596 aaKnown RBP9.7□□□□□ -0.86
PRDM1-201ENST00000369089 ATG10Q9H0Y0 220 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 ASB8Q9H765 288 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 A4GNTQ9UNA3 340 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 KLF2Q9Y5W3 355 aaPredicted RBP9.7□□□□□ -0.86
PRDM1-201ENST00000369089 GCGP01275 180 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 LIPCP11150 499 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 EPHA2P29317 976 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 SULT1A1P50225 295 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 OR7A5Q15622 319 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 SSX1Q16384 188 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 PLA1AQ53H76 456 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 PSRC1Q6PGN9 363 aaPredicted RBP9.7□□□□□ -0.86
PRDM1-201ENST00000369089 CEACAM20Q6UY09 585 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 ZNF534Q76KX8 674 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 FCRLAQ7L513 359 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 ANGPTL5Q86XS5 388 aa9.7□□□□□ -0.86
PRDM1-201ENST00000369089 ZNF430Q9H8G1 570 aaPredicted RBP9.7□□□□□ -0.86
PRDM1-201ENST00000369089 SLC25A12O75746 678 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 HEXAP06865 529 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 DAOP14920 347 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 OR10J1P30954 320 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 RPIAP49247 311 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 HTRA3P83110 453 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 TPBGQ13641 420 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 PMS2P11Q13670 270 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 TAF9Q16594 264 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 NKPD1Q17RQ9 610 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 LCTLQ6UWM7 567 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 APCDD1Q8J025 514 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 ACVR1CQ8NER5 493 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 OR6K6Q8NGW6 343 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 OR5AK3PQ8NH89 298 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 NDRG1Q92597 394 aaKnown RBP9.69□□□□□ -0.86
PRDM1-201ENST00000369089 MISP3Q96FF7 219 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 TAPBPLQ9BX59 468 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.69□□□□□ -0.86
PRDM1-201ENST00000369089 PCTPQ9UKL6 214 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 DTX4Q9Y2E6 619 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 MMACHCQ9Y4U1 282 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 UNC119BA6NIH7 251 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 LDLRAD4O15165 306 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 MTX2O75431 263 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 BPNT1O95861 308 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 IFNA5P01569 189 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 IGHV2-70P01814 119 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 HBE1P02100 147 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 NDUFS1P28331 727 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 PBX3P40426 434 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 HTR6P50406 440 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 RABGGTBP53611 331 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 NRG3P56975 720 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 LMAN2Q12907 356 aa9.69□□□□□ -0.86
PRDM1-201ENST00000369089 C11orf87Q6NUJ2 197 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms