RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 NPIPA7E9PJI5 369 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 E9PLN8 166 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 TPST2O60704 377 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 NPIPA8P0DM63 369 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 CYP4B1P13584 511 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 GSTM3P21266 225 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 PCOLCEQ15113 449 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 SEC23BQ15437 767 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 PODNL1Q6PEZ8 512 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 TMEM205Q6UW68 189 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 SPNS3Q6ZMD2 512 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 ZNF517Q6ZMY9 492 aaPredicted RBP7.96□□□□□ -1.13
TPM3-213ENST00000368545 SHISA6Q6ZSJ9 500 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 RRM2BQ7LG56 351 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 ZNF550Q7Z398 422 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 ZNF440Q8IYI8 595 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 ZNF614Q8N883 585 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 ZNF321PQ8N8H1 164 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 B3GNT7Q8NFL0 401 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 TSPAN14Q8NG11 270 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 OR4K5Q8NGD3 323 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 ACOT11Q8WXI4 607 aaPredicted RBP7.96□□□□□ -1.13
TPM3-213ENST00000368545 SLC41A3Q96GZ6 507 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 LPAR4Q99677 370 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 VKORC1Q9BQB6 163 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 ZNF559Q9BR84 538 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 DDA1Q9BW61 102 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 UCK2Q9BZX2 261 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 NXF5Q9H1B4 397 aaKnown RBP7.96□□□□□ -1.13
TPM3-213ENST00000368545 TUBA8Q9NY65 449 aaPredicted RBP7.96□□□□□ -1.13
TPM3-213ENST00000368545 HSF4Q9ULV5 492 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 LOXL2Q9Y4K0 774 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 DOPEY2Q9Y3R5 2298 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 TRIM64A6NGJ6 449 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 TNFSF15O95150 251 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 CLPTM1O96005 669 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 SMIM18P0DKX4 95 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 HPGDP15428 266 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 IL12BP29460 328 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 CLK3P49761 638 aaKnown RBP7.96□□□□□ -1.14
TPM3-213ENST00000368545 GPR143P51810 404 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 GTF2A1P52655 376 aaPredicted RBP7.96□□□□□ -1.14
TPM3-213ENST00000368545 ISL1P61371 349 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 RPP38P78345 283 aaKnown RBP7.96□□□□□ -1.14
TPM3-213ENST00000368545 IL5RAQ01344 420 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 RAPSNQ13702 412 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 APOFQ13790 326 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 KIF26BQ2KJY2 2108 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 C1orf94Q6P1W5 598 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 ZNF613Q6PF04 617 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 PAPD4Q6PIY7 484 aaKnown RBP7.96□□□□□ -1.14
TPM3-213ENST00000368545 FAM198BQ6UWH4 519 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 ZNF730Q6ZMV8 503 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 CPEB2Q7Z5Q1 589 aaKnown RBP7.96□□□□□ -1.14
TPM3-213ENST00000368545 ZNF441Q8N8Z8 693 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 EXPH5Q8NEV8 1989 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 OR5M3Q8NGP4 307 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 OR8K3Q8NH51 312 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 NUBPLQ8TB37 319 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 VMP1Q96GC9 406 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 UBQLN4Q9NRR5 601 aa7.96□□□□□ -1.14
TPM3-213ENST00000368545 A0A087WXM4 84 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 OR14I1A6ND48 311 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 CSTAP01040 98 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 NGFRP08138 427 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 POU2F1P14859 743 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 GGT2P36268 569 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 POLR2IP36954 125 aaKnown RBP7.95□□□□□ -1.14
TPM3-213ENST00000368545 GABARAPL2P60520 117 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 TUBA4AP68366 448 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 CD47Q08722 323 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 PLCXD2Q0VAA5 305 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 OR1Q1Q15612 314 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 HSDL2Q6YN16 418 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 GDF7Q7Z4P5 450 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 PPP1R32Q7Z5V6 425 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 APCDD1LQ8NCL9 501 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 NFAM1Q8NET5 270 aaPredicted RBP7.95□□□□□ -1.14
TPM3-213ENST00000368545 NLGN4YQ8NFZ3 816 aaPredicted RBP7.95□□□□□ -1.14
TPM3-213ENST00000368545 PIGXQ8TBF5 258 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 MR1Q95460 341 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 EFHD2Q96C19 240 aaPredicted RBP7.95□□□□□ -1.14
TPM3-213ENST00000368545 TRIM2Q9C040 744 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 SLC25A32Q9H2D1 315 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 TMEM27Q9HBJ8 222 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 CTPS2Q9NRF8 586 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 SLC7A7Q9UM01 511 aa7.95□□□□□ -1.14
TPM3-213ENST00000368545 A0A087WUU8 490 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 SERINC4A6NH21 518 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 CNOT3O75175 753 aaKnown RBP7.94□□□□□ -1.14
TPM3-213ENST00000368545 UTS2O95399 124 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 CCDC159P0C7I6 412 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 GKN3PP0CG01 181 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 ZNF28P17035 718 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 TBXA2RP21731 343 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 HTR2AP28223 471 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 NR0B1P51843 470 aaKnown RBP7.94□□□□□ -1.14
TPM3-213ENST00000368545 CRISP1P54107 249 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 PNLIPRP2P54317 469 aa7.94□□□□□ -1.14
TPM3-213ENST00000368545 CDC42P60953 191 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms