RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 DCAF4L2Q8NA75 395 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 OR1L4Q8NGR5 311 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 MAGEE2Q8TD90 523 aaPredicted RBP2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 ARPC1AQ92747 370 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 UFD1Q92890 307 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 C12orf42Q96LP6 360 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 COPS8Q99627 209 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 CCT7Q99832 543 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 RAB34Q9BZG1 259 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 POLR2J2Q9GZM3 115 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 ACTR6Q9GZN1 396 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 POLR2J3Q9H1A7 115 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 REEP4Q9H6H4 257 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 MCCC2Q9HCC0 563 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 SEC14L3Q9UDX4 400 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 BTNL2Q9UIR0 455 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 TRAF3IP3Q9Y228 551 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 NEUROG3Q9Y4Z2 214 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 CDH10Q9Y6N8 788 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 DDX49Q9Y6V7 483 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 PLEKHG1Q9ULL1 1385 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 SH3TC1Q8TE82 1336 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 IGLV3-22A0A075B6J6 115 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 HELTA6NFD8 242 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 HIP1O00291 1037 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 MED7O43513 233 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 UGT1A9O60656 530 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 TNFSF13O75888 250 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 MOSP00540 346 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 HSMCR30P0CW71 290 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 ZNF17P17021 662 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 MDKP21741 143 aaPredicted RBP2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 COX7A1P24310 79 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 CCNE1P24864 410 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 HTR1EP28566 365 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 VDAC2P45880 294 aaPredicted RBP2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 UCNP55089 124 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 PRPS1P60891 318 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 IRX3P78415 501 aaPredicted RBP2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 UNC119Q13432 240 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 OXA1LQ15070 435 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 PARP15Q460N3 678 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 ZNF658BQ4V348 819 aaPredicted RBP2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 LRRC23Q53EV4 343 aaPredicted RBP2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 TIGD3Q6B0B8 471 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 CTRB2Q6GPI1 263 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 C11orf71Q6IPW1 123 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 EFL1Q7Z2Z2 1120 aaKnown RBP2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 ZNF571Q7Z3V5 609 aaPredicted RBP2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 CCDC50Q8IVM0 306 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 PNKDQ8N490 385 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 SUMF2Q8NBJ7 301 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 BHLHE23Q8NDY6 225 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 SDR9C7Q8NEX9 313 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 OR9G1Q8NH87 305 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 MYDGFQ969H8 173 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 RPRD1AQ96P16 312 aaPredicted RBP2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 CLCC1Q96S66 551 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 FMO2Q99518 471 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 HES7Q9BYE0 225 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 ROPN1BQ9BZX4 212 aaPredicted RBP2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 LRRC40Q9H9A6 602 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 FN3KRPQ9HA64 309 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 EXTL2Q9UBQ6 330 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 MTRF1LQ9UGC7 380 aaKnown RBP2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 COPS3Q9UNS2 423 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 PIGLQ9Y2B2 252 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 KCNIP3Q9Y2W7 256 aa2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 RPL36Q9Y3U8 105 aaKnown RBP2.28□□□□□ -2.04
ECHDC1-201ENST00000368287 IQANK1A0A1B0GTG1 560 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 A0A1B0GUA9 196 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 A0A1W2PPV9 198 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 ARHGEF35A5YM69 484 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 A8MXQ7 604 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 FAM189A1O60320 539 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 B4GALT2O60909 372 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 CA11O75493 328 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 SCGNO76038 276 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 TSPAN12O95859 305 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 CHTF8P0CG12 524 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 DBTP11182 482 aaKnown RBP2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 ETS2P15036 469 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 OPRD1P41143 372 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 KIR2DS4P43632 304 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 CRYBB1P53674 252 aaPredicted RBP2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 NUP107P57740 925 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 REG3AQ06141 175 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 ARFRP1Q13795 201 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 NSDHLQ15738 373 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 MPPED2Q15777 294 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 FILIP1LQ4L180 1135 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 CEP55Q53EZ4 464 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 CASC10Q5T4H9 136 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 IGFL2Q6UWQ7 119 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 TMIGD1Q6UXZ0 262 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 HSDL2Q6YN16 418 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 Q6ZN92 141 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 ACP7Q6ZNF0 438 aa2.27□□□□□ -2.05
ECHDC1-201ENST00000368287 ZNF620Q6ZNG0 422 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms