RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 C19orf67A6NJJ6 358 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 CDX4O14627 284 aaPredicted RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 RDH16O75452 317 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 ARSDP51689 593 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 CEBPEQ15744 281 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 TMEM205Q6UW68 189 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 HTR3DQ70Z44 454 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 SUMF2Q8NBJ7 301 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 AQP11Q8NBQ7 271 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 FAM83FQ8NEG4 500 aaPredicted RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 OR10D4PQ8NGN7 298 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 OR6K3Q8NGY3 331 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 TMPRSS5Q9H3S3 457 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 ACP6Q9NPH0 428 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 B3GNT2Q9NY97 397 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 NOSIPQ9Y314 301 aaKnown RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 SOX21Q9Y651 276 aaPredicted RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 TAF1LQ8IZX4 1826 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 TRBC2A0A5B9 178 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 PRSS38A1L453 326 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 A6NIZ1 184 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 EPOP01588 193 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 RPS19P39019 145 aaKnown RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 HLCSP50747 726 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 WDR4P57081 412 aaKnown RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 RAP1BP61224 184 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 RAP1AP62834 184 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 SLC36A2Q495M3 483 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 LRRC55Q6ZSA7 311 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 CD163Q86VB7 1156 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 LRRC25Q8N386 305 aaPredicted RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 PYURFQ96I23 114 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 RBM24Q9BX46 236 aaKnown RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 OR51E2Q9H255 320 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 EGLN3Q9H6Z9 239 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 PLSCR2Q9NRY7 297 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 TEX10Q9NXF1 929 aaPredicted RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 SLC17A6Q9P2U8 582 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 SBF2Q86WG5 1849 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 CACNA1SQ13698 1873 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 CLN5O75503 358 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 CLDN7O95471 211 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 TFP02787 698 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 MPC1LP0DKB6 136 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 ITGB8P26012 769 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 ADARB1P78563 741 aaKnown RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 RNASE10Q5GAN6 216 aaKnown RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 C22orf42Q6IC83 251 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 TMEM88Q6PEY1 159 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 Q6ZNX1 250 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 IRF2BP2Q7Z5L9 587 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 SLC25A44Q96H78 314 aaPredicted RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 PRRC1Q96M27 445 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 TIMP4Q99727 224 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 SARGQ9BW04 601 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 P2RY12Q9H244 342 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 GORASP2Q9H8Y8 452 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 SIRT3Q9NTG7 399 aaPredicted RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 VNN3Q9NY84 501 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 DNAJC27Q9NZQ0 273 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 DUSP13Q9UII6 198 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 MYH1P12882 1939 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 KIAA0100Q14667 2235 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 A0A0G2JN53 185 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF587BE7ETH6 402 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 H0YIV9 168 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 EIF1BO60739 113 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 GOT2P00505 430 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 ADRB2P07550 413 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 HOXD4P09016 255 aaPredicted RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 TPT1P13693 172 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 IL9P15248 144 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 AQP2P41181 271 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 SLC6A12P48065 614 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 SLC18A1P54219 525 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 RPS16P62249 146 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 PPP1R8Q12972 351 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 SOWAHAQ2M3V2 549 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 BCL2L15Q5TBC7 163 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 DEGS2Q6QHC5 323 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 MMP21Q8N119 569 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 H1FXQ92522 213 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 CPNE4Q96A23 557 aaPredicted RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 MSI2Q96DH6 328 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 MUS81Q96NY9 551 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 FCRL5Q96RD9 977 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 TSSK6Q9BXA6 273 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 ALOXE3Q9BYJ1 711 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 OR51B6Q9H340 312 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 DPEP3Q9H4B8 488 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 PLCXD1Q9NUJ7 323 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 TNRC6CQ9HCJ0 1690 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 PRAF2O60831 178 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 S1PR1P21453 382 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 FRKP42685 505 aaPredicted RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 CSNK1A1P48729 337 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 RPS26P62854 115 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 KLRB1Q12918 225 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 OR8B8Q15620 311 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 BRWD3Q6RI45 1802 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms