RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 RPS26P11Q5JNZ5 115 aaPredicted RBP12.98□□□□□ -0.33
CTSD-202ENST00000367196 PODNL1Q6PEZ8 512 aa12.98□□□□□ -0.33
CTSD-202ENST00000367196 CXXC5Q7LFL8 322 aaKnown RBP12.98□□□□□ -0.33
CTSD-202ENST00000367196 GOLGA6L1Q8N7Z2 621 aa12.98□□□□□ -0.33
CTSD-202ENST00000367196 ELOA3Q8NG57 546 aa12.98□□□□□ -0.33
CTSD-202ENST00000367196 OR10H5Q8NGA6 315 aa12.98□□□□□ -0.33
CTSD-202ENST00000367196 MFSD8Q8NHS3 518 aa12.98□□□□□ -0.33
CTSD-202ENST00000367196 FAM168AQ92567 244 aa12.98□□□□□ -0.33
CTSD-202ENST00000367196 VPS33AQ96AX1 596 aa12.98□□□□□ -0.33
CTSD-202ENST00000367196 C3orf49Q96BT1 292 aa12.98□□□□□ -0.33
CTSD-202ENST00000367196 AURKBQ96GD4 344 aaPredicted RBP12.98□□□□□ -0.33
CTSD-202ENST00000367196 C1QTNF6Q9BXI9 259 aa12.98□□□□□ -0.33
CTSD-202ENST00000367196 C12orf10Q9HB07 376 aa12.98□□□□□ -0.33
CTSD-202ENST00000367196 BCL2L10Q9HD36 194 aa12.98□□□□□ -0.33
CTSD-202ENST00000367196 A4GALTQ9NPC4 353 aa12.98□□□□□ -0.33
CTSD-202ENST00000367196 FBXO9Q9UK97 447 aaPredicted RBP12.98□□□□□ -0.33
CTSD-202ENST00000367196 ATRQ13535 2644 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 IGHV4-30-2A0A087WSY4 118 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 TMEM229AB2RXF0 380 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 CLIC1O00299 241 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 POLR3GO15318 223 aaPredicted RBP12.97□□□□□ -0.33
CTSD-202ENST00000367196 OR2T1O43869 369 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 NPIPB7O75200 414 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 CRYAAP02489 173 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 ETS2P15036 469 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 EFNA4P52798 201 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 SNRPD2P62316 118 aaKnown RBP12.97□□□□□ -0.33
CTSD-202ENST00000367196 SLC25A3Q00325 362 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 C3orf36Q3SXR2 165 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 CHRFAM7AQ494W8 412 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 HMBOX1Q6NT76 420 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 NIPAL3Q6P499 406 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 CREB3L2Q70SY1 520 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 SERPINA11Q86U17 422 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 KRT73Q86Y46 540 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 HIPK1Q86Z02 1210 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 CLIP4Q8N3C7 705 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 ZIC4Q8N9L1 334 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 ANKK1Q8NFD2 765 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 SPATA3Q8NHX4 192 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 PROX1Q92786 737 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 ZBTB9Q96C00 473 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 ALKBH3Q96Q83 286 aaPredicted RBP12.97□□□□□ -0.33
CTSD-202ENST00000367196 SLC38A2Q96QD8 506 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 OR52B2Q96RD2 323 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 TNFRSF13CQ96RJ3 184 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 KATNB1Q9BVA0 655 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 SPATA5L1Q9BVQ7 753 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 ADAM21Q9UKJ8 722 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 CORO2BQ9UQ03 480 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 RCE1Q9Y256 329 aa12.97□□□□□ -0.33
CTSD-202ENST00000367196 ARPC4-TTLL3A0A0A6YYG9 625 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 ATP6V1G2-DDX39BF2Z307 99 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 TGDSO95455 350 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 PNMTP11086 282 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 BMP2P12643 396 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 HOXB1P14653 301 aaPredicted RBP12.96□□□□□ -0.33
CTSD-202ENST00000367196 ZNF43P17038 809 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 PRKAR1BP31321 381 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 MRPL19P49406 292 aaKnown RBP12.96□□□□□ -0.33
CTSD-202ENST00000367196 SELENOPP49908 381 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 P2RY4P51582 365 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 NCALDP61601 193 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 TMEM249Q2WGJ8 235 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 TBRG1Q3YBR2 411 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 GTDC1Q4AE62 458 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 HIKESHIQ53FT3 197 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 C6orf52Q5T4I8 152 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 MAVSQ7Z434 540 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 ZNF525Q8N782 197 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 BHLHE22Q8NFJ8 381 aaPredicted RBP12.96□□□□□ -0.33
CTSD-202ENST00000367196 OR9I1Q8NGQ6 314 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 OR1K1Q8NGR3 316 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 MAGEE2Q8TD90 523 aaPredicted RBP12.96□□□□□ -0.33
CTSD-202ENST00000367196 GTF2H4Q92759 462 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 SLC38A4Q969I6 547 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 TLCD1Q96CP7 247 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 C7orf26Q96N11 449 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 MDFIQ99750 246 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 LINC00470Q9BZP3 86 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 MYOZ1Q9NP98 299 aaPredicted RBP12.96□□□□□ -0.33
CTSD-202ENST00000367196 TCF7L2Q9NQB0 619 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 SELENONQ9NZV5 590 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 CDC42EP3Q9UKI2 254 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 MOKQ9UQ07 419 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 PCDHB14Q9Y5E9 798 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 USH1CQ9Y6N9 552 aa12.96□□□□□ -0.33
CTSD-202ENST00000367196 ALPK2Q86TB3 2170 aa12.96□□□□□ -0.34
CTSD-202ENST00000367196 DNHD1Q96M86 4753 aa12.95□□□□□ -0.34
CTSD-202ENST00000367196 AIM2O14862 343 aa12.95□□□□□ -0.34
CTSD-202ENST00000367196 SLC43A1O75387 559 aa12.95□□□□□ -0.34
CTSD-202ENST00000367196 PDE5AO76074 875 aa12.95□□□□□ -0.34
CTSD-202ENST00000367196 LGI1O95970 557 aa12.95□□□□□ -0.34
CTSD-202ENST00000367196 PRG2P13727 222 aa12.95□□□□□ -0.34
CTSD-202ENST00000367196 RPS5P46782 204 aaKnown RBP12.95□□□□□ -0.34
CTSD-202ENST00000367196 VLDLRP98155 873 aa12.95□□□□□ -0.34
CTSD-202ENST00000367196 C1DQ13901 141 aaKnown RBP12.95□□□□□ -0.34
CTSD-202ENST00000367196 MFSD13AQ14CX5 517 aa12.95□□□□□ -0.34
CTSD-202ENST00000367196 FAM69AQ5T7M9 428 aa12.95□□□□□ -0.34
CTSD-202ENST00000367196 ANKRD16Q6P6B7 361 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms