RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 LGI1O95970 557 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 APOOLQ6UXV4 268 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 MOB1AQ9H8S9 216 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 MFSD12Q6NUT3 480 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 OR6M1Q8NGM8 313 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 ZBTB8AQ96BR9 441 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 BCL2L10Q9HD36 194 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 TNFRSF10AO00220 468 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 ARSAP15289 507 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 CXADRP78310 365 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 FCRL6Q6DN72 434 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 OR51L1Q8NGJ5 315 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 RTP3Q9BQQ7 232 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 SYNPO2LQ9H987 977 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 PCDHGA6Q9Y5G7 932 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 ZNF195O14628 629 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 MAP2K6P52564 334 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 RBM39Q14498 530 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 BEND4Q6ZU67 534 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 C12orf76Q8N812 135 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 SDR9C7Q8NEX9 313 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 ENKD1Q9H0I2 346 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 PRSS16Q9NQE7 514 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 THAP10Q9P2Z0 257 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 PMS2P2O95744 297 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 TACR1P25103 407 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 SLC22A6Q4U2R8 563 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 TIGD3Q6B0B8 471 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 SLC22A24Q8N4F4 322 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 DCDC2BA2VCK2 349 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 ITGB2P05107 769 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 FAM78AQ5JUQ0 283 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 TM4SF18Q96CE8 201 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 UBQLN3Q9H347 655 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 DDAH2O95865 285 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 ECH1Q13011 328 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 TMEM201Q5SNT2 666 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 ADGRE4PQ86SQ3 457 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 TOE1Q96GM8 510 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 LCORQ96JN0 433 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 CXorf36Q9H7Y0 433 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 ATG4BQ9Y4P1 393 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 TRAV27A0A087WT01 109 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 GABARAPH6UMI1 98 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 NUDT21O43809 227 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 EIF4E2O60573 245 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 CTNSO60931 367 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 HLA-DMAP28067 261 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 HTR2CP28335 458 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 MCCD1P59942 119 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 NR0B2Q15466 257 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 C11orf91Q3C1V1 193 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 TMEM68Q96MH6 324 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 ZNF285Q96NJ3 590 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 ANKRD30BLA7E2S9 258 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 LDB3O75112 727 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 ZNF585AQ6P3V2 769 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 ANKRD33Q7Z3H0 272 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 WDR83Q9BRX9 315 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 ZNF286AQ9HBT8 521 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 A0A1W2PS29 197 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 ELK1P19419 428 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 ELP2Q6IA86 826 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 GHSRQ92847 366 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 TMEM106AQ96A25 262 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 TMEM59Q9BXS4 323 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 HCFC2Q9Y5Z7 792 aa11.17□□□□□ -0.62
CDC42BPA-203ENST00000366766 H3BSH0 61 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 ATP1B1P05026 303 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 ELOVL3Q9HB03 270 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 TMEM184BQ9Y519 407 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 ARPC4-TTLL3A0A0A6YYG9 625 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 CTDSP2O14595 271 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 CPEP16870 476 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 GALP22466 123 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 DDOSTP39656 456 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 LAX1Q8IWV1 398 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 LMNTD1Q8N9Z9 388 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 OR13C2Q8NGS9 318 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 GPATCH2Q9NW75 528 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 PLEK2Q9NYT0 353 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 LRFN1Q9P244 771 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 A0A087WV62 115 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 SLC9B1P1A6NJY1 282 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 A6NLC8 198 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 TRHRP34981 398 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 CASP3P42574 277 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 CAV2P51636 162 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 GRB2P62993 217 aaKnown RBP11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 HBG1P69891 147 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 HBG2P69892 147 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 LRRC26Q2I0M4 334 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 SYT14P1Q58G82 188 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 VRK2Q86Y07 508 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 ACBD4Q8NC06 268 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 A0A0A6YYC8 382 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 LOC100289279A0A1B0GTE1 492 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 I3L1I5 382 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 FRS3O43559 492 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 SLC16A7O60669 478 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms