RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 UPB1Q9UBR1 384 aa11.98□□□□□ -0.49
TNFRSF1A-202ENST00000366159 BOLA1Q9Y3E2 137 aa11.98□□□□□ -0.49
TNFRSF1A-202ENST00000366159 IGKV1D-42A0A075B6H8 117 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 HMGB1P1B2RPK0 211 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 TPST2O60704 377 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 NDUFS7O75251 213 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 H2AFXP16104 143 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 TTKP33981 857 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 ZNF83P51522 516 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 CDH11P55287 796 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 CDK6Q00534 326 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 TGFBR3Q03167 851 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 CLEC12BQ2HXU8 276 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 GLIPR1L2Q4G1C9 344 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 RUNDC3AQ59EK9 446 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 GCNT6Q5T4J0 391 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 C9orf135Q5VTT2 229 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 TMEM225Q6GV28 225 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 KLHL17Q6TDP4 642 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 B3GLCTQ6Y288 498 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 LINGO2Q7L985 606 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 GPAT4Q86UL3 456 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 DPP10Q8N608 796 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 MAGEB18Q96M61 343 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 WFDC6Q9BQY6 131 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 CPPED1Q9BRF8 314 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 INTS9Q9NV88 658 aaKnown RBP11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 ADPRHL2Q9NX46 363 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 B3GAT1Q9P2W7 334 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 RASD1Q9Y272 281 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 B3GALT5Q9Y2C3 310 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 AMDHD2Q9Y303 409 aa11.97□□□□□ -0.49
TNFRSF1A-202ENST00000366159 A0A1B0GWA3 101 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 C5orf58C9J3I9 102 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 ZNF432O94892 652 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 PNMTP11086 282 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 SELENOPP49908 381 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 PCBP3P57721 371 aaKnown RBP11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 LGALS3BPQ08380 585 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 HDXQ7Z353 690 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 PTOV1Q86YD1 416 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 SLC38A4Q969I6 547 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 DHRS9Q9BPW9 319 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 SPATA5L1Q9BVQ7 753 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 PRR14Q9BWN1 585 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 C1QTNF6Q9BXI9 259 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 LINC00470Q9BZP3 86 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 RABEP2Q9H5N1 569 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 CACYBPQ9HB71 228 aaKnown RBP11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 FAIMQ9NVQ4 179 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 SEC14L4Q9UDX3 406 aa11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 GDF2Q9UK05 429 aaPredicted RBP11.96□□□□□ -0.49
TNFRSF1A-202ENST00000366159 ABCA2Q9BZC7 2435 aa11.96□□□□□ -0.5
TNFRSF1A-202ENST00000366159 LOC102725191A0A1B0GVB3 256 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 RPL36A-HNRNPH2H7BZ11 118 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 M0R1B8 84 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 MFN2O95140 757 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 AHSA1O95433 338 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 PTNP21246 168 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 ACVR1BP36896 505 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 RPS5P46782 204 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 SCARB2Q14108 478 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 AGAP6Q5VW22 663 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 FAM91A1Q658Y4 838 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 C5orf46Q6UWT4 87 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 NHLRC1Q6VVB1 395 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 RETREG3Q86VR2 466 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 KDM8Q8N371 416 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 OR1K1Q8NGR3 316 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 OR6S1Q8NH40 331 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 TSPEARQ8WU66 669 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 DNAJA4Q8WW22 397 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 DYDC1Q8WWB3 177 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 BCL2L2Q92843 193 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 TAAR8Q969N4 342 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 GTPBP3Q969Y2 492 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 SLC41A3Q96GZ6 507 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 NELFAQ9H3P2 528 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 CBLN4Q9NTU7 201 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 CORO2BQ9UQ03 480 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 HIVEP2P31629 2446 aa11.95□□□□□ -0.5
TNFRSF1A-202ENST00000366159 A0A087WUJ7 227 aa11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 A0A0B4J2E0 115 aa11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 A0A1B0GX12 115 aa11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 OR6C65A6NJZ3 312 aa11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 ELOA3DA6NLF2 546 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 EVPLLA8MZ36 301 aa11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 OR2T1O43869 369 aa11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 EDF1O60869 148 aaKnown RBP11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 UPK3AO75631 287 aa11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 SASH3O75995 380 aa11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 SLC6A2P23975 617 aa11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 PRPS1P60891 318 aa11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 DMTNQ08495 405 aa11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 ELOA3BQ3SY89 546 aa11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 HIKESHIQ53FT3 197 aa11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 FAM69AQ5T7M9 428 aa11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 ZNF544Q6NX49 715 aa11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 NIPAL3Q6P499 406 aa11.94□□□□□ -0.5
TNFRSF1A-202ENST00000366159 ULK3Q6PHR2 472 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms