RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 PRKNO60260 465 aaPredicted RBP17.17■□□□□ 0.34
CLIP2-202ENST00000361545 ABHD16AO95870 558 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 ERVK-16P61578 105 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 MEX3BQ6ZN04 569 aaKnown RBP17.17■□□□□ 0.34
CLIP2-202ENST00000361545 ESPNLQ6ZVH7 1005 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 PHC2Q8IXK0 858 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 COG8Q96MW5 612 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 LAMB1P07942 1786 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 OTOL1A6NHN0 477 aaPredicted RBP17.16■□□□□ 0.34
CLIP2-202ENST00000361545 TMPRSS11DO60235 418 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 ALPLP05186 524 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 CD53P19397 219 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 CRMP1Q14194 572 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 GOT1L1Q8NHS2 421 aaPredicted RBP17.16■□□□□ 0.34
CLIP2-202ENST00000361545 CCDC32Q9BV29 185 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 RAB9BQ9NP90 201 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 A8MVM7 634 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 B4DXG7 233 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 ZNF587BE7ETH6 402 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 H3BMQ9 156 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 BOLA2-SMG1P6H3BVE0 249 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 EFNA3P52797 238 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 GAB1Q13480 694 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 HLA-BQ31612 363 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 EXOSC6Q5RKV6 272 aaKnown RBP17.16■□□□□ 0.34
CLIP2-202ENST00000361545 SLC15A4Q8N697 577 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 ASCC1Q8N9N2 400 aaKnown RBP17.16■□□□□ 0.34
CLIP2-202ENST00000361545 ACBD4Q8NC06 268 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 RSPRY1Q96DX4 576 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 MAELQ96JY0 434 aaKnown RBP17.16■□□□□ 0.34
CLIP2-202ENST00000361545 DEFB127Q9H1M4 99 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 MAB21L2Q9Y586 359 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 OR51B4Q9Y5P0 310 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 A0A1B0GV50 99 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 PIP5K1CO60331 668 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 MRPS14O60783 128 aaKnown RBP17.16■□□□□ 0.34
CLIP2-202ENST00000361545 ELAVL4P26378 380 aaKnown RBP17.16■□□□□ 0.34
CLIP2-202ENST00000361545 LTC4SQ16873 150 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 GLYR1Q49A26 553 aaPredicted RBP17.16■□□□□ 0.34
CLIP2-202ENST00000361545 CCDC74BQ96LY2 380 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 CCDC86Q9H6F5 360 aaKnown RBP17.16■□□□□ 0.34
CLIP2-202ENST00000361545 APMAPQ9HDC9 416 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 PPP5CP53041 499 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 OR13C9Q8NGT0 318 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 MFRPQ9BY79 579 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 OLAHQ9NV23 265 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 CORINQ9Y5Q5 1042 aa17.16■□□□□ 0.34
CLIP2-202ENST00000361545 AKR7A3O95154 331 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 C1orf140Q5VVS0 124 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 LAMA4Q16363 1823 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 ACOD1A6NK06 481 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 SYT5O00445 386 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 LYRM1O43325 122 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 NSA2O95478 260 aaKnown RBP17.15■□□□□ 0.34
CLIP2-202ENST00000361545 MFAP5Q13361 173 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 OR4K15Q8NH41 348 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 ECM29Q5VYK3 1845 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 NOVA1P51513 510 aaKnown RBP17.15■□□□□ 0.34
CLIP2-202ENST00000361545 GDPD1Q8N9F7 314 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 AMBRA1Q9C0C7 1298 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 SNX11Q9Y5W9 270 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 STRCQ7RTU9 1775 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 GOSR2O14653 212 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 SSX5O60225 188 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 MTCP1P56278 107 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 ARF1P84077 181 aaKnown RBP17.15■□□□□ 0.34
CLIP2-202ENST00000361545 FOXK2Q01167 660 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 LILRA6Q6PI73 481 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 RABL2AQ9UBK7 228 aaPredicted RBP17.15■□□□□ 0.34
CLIP2-202ENST00000361545 RABL2BQ9UNT1 228 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 ZNF281Q9Y2X9 895 aa17.15■□□□□ 0.34
CLIP2-202ENST00000361545 LSM5Q9Y4Y9 91 aaKnown RBP17.15■□□□□ 0.34
CLIP2-202ENST00000361545 OR7C1O76099 320 aaPredicted RBP17.14■□□□□ 0.34
CLIP2-202ENST00000361545 IFNA2P01563 188 aa17.14■□□□□ 0.34
CLIP2-202ENST00000361545 LIPCP11150 499 aa17.14■□□□□ 0.34
CLIP2-202ENST00000361545 FCGR2AP12318 317 aa17.14■□□□□ 0.34
CLIP2-202ENST00000361545 HLA-DMAP28067 261 aa17.14■□□□□ 0.34
CLIP2-202ENST00000361545 SLC6A12P48065 614 aa17.14■□□□□ 0.34
CLIP2-202ENST00000361545 CAV2P51636 162 aa17.14■□□□□ 0.34
CLIP2-202ENST00000361545 PRICKLE2Q7Z3G6 844 aa17.14■□□□□ 0.34
CLIP2-202ENST00000361545 OR5D18Q8NGL1 313 aa17.14■□□□□ 0.34
CLIP2-202ENST00000361545 ENPP5Q9UJA9 477 aa17.14■□□□□ 0.34
CLIP2-202ENST00000361545 SPTY2D1-AS1A0A0U1RR47 76 aa17.14■□□□□ 0.33
CLIP2-202ENST00000361545 NR4A2P43354 598 aa17.14■□□□□ 0.33
CLIP2-202ENST00000361545 YOD1Q5VVQ6 348 aaPredicted RBP17.14■□□□□ 0.33
CLIP2-202ENST00000361545 RPL22L1Q6P5R6 122 aaKnown RBP17.14■□□□□ 0.33
CLIP2-202ENST00000361545 Q7L0L9 218 aa17.14■□□□□ 0.33
CLIP2-202ENST00000361545 SGPP2Q8IWX5 399 aa17.14■□□□□ 0.33
CLIP2-202ENST00000361545 PELI3Q8N2H9 469 aa17.14■□□□□ 0.33
CLIP2-202ENST00000361545 ZNF511Q8NB15 262 aa17.14■□□□□ 0.33
CLIP2-202ENST00000361545 FOXRED1Q96CU9 486 aaPredicted RBP17.14■□□□□ 0.33
CLIP2-202ENST00000361545 STACQ99469 402 aa17.14■□□□□ 0.33
CLIP2-202ENST00000361545 GPR171O14626 319 aa17.14■□□□□ 0.33
CLIP2-202ENST00000361545 CRHBPP24387 322 aa17.14■□□□□ 0.33
CLIP2-202ENST00000361545 ZNF684Q5T5D7 378 aa17.14■□□□□ 0.33
CLIP2-202ENST00000361545 RBM45Q8IUH3 476 aaKnown RBP17.14■□□□□ 0.33
CLIP2-202ENST00000361545 PSMF1Q92530 271 aa17.14■□□□□ 0.33
CLIP2-202ENST00000361545 RASD2Q96D21 266 aa17.14■□□□□ 0.33
CLIP2-202ENST00000361545 CDK5RAP2Q96SN8 1893 aa17.14■□□□□ 0.33
CLIP2-202ENST00000361545 TMEM38AQ9H6F2 299 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms