RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 CDC42EP2O14613 210 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 TSPAN4O14817 238 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 ZNF780AO75290 641 aaPredicted RBP12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 PGGHGQ32M88 737 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 FAM198BQ6UWH4 519 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 OVCH1Q7RTY7 1134 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 ZNF440Q8IYI8 595 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 ZSCAN1Q8NBB4 408 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 OR2T33Q8NG76 320 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 MALT1Q9UDY8 824 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 MRTO4Q9UKD2 239 aaKnown RBP12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 STUB1Q9UNE7 303 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 TRAPPC4Q9Y296 219 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 SLC35A3Q9Y2D2 325 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 CLCA3PQ9Y6N3 262 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 A0A1B0GWA3 101 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 SURF4O15260 269 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 NOS1APO75052 506 aaPredicted RBP12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 IGKV3-11P04433 115 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 PSKH1P11801 424 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 FOSL1P15407 271 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 LCN1P31025 176 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 DDOSTP39656 456 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 ADH7P40394 386 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 DCAF7P61962 342 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 TMPRSS7Q7RTY8 843 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 NOXA1Q86UR1 476 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 SYT14Q8NB59 555 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 PROKR2Q8NFJ6 384 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 OR4Q3Q8NH05 313 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 LHFPL5Q8TAF8 219 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 ZPBPQ9BS86 351 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 ZNF426Q9BUY5 554 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 MND1Q9BWT6 205 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 C11orf54Q9H0W9 315 aaPredicted RBP12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 MIXL1Q9H2W2 232 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 FLRT3Q9NZU0 649 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 IGLV3-12A0A075B6K2 115 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 ARPC4-TTLL3A0A0A6YYG9 625 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 ZNF670-ZNF695F2Z2N8 137 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 MYL12BO14950 172 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 RCBTB2O95199 551 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 RAB36O95755 333 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 IL33O95760 270 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 RAB40BQ12829 278 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 KLHL26Q53HC5 615 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 CLEC12AQ5QGZ9 265 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 LINC00114Q6XXX2 140 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 LANCL3Q6ZV70 420 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 LURAP1LQ8IV03 231 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 OR4M2Q8NGB6 313 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 OR14A16Q8NHC5 309 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 ZNF721Q8TF20 911 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 DAZLQ92904 295 aaKnown RBP12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 RFKQ969G6 155 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 BPIFA2Q96DR5 249 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 DIRAS2Q96HU8 199 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 LRFN5Q96NI6 719 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 SPSB2Q99619 263 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 DPH1Q9BZG8 443 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 FGF20Q9NP95 211 aaPredicted RBP12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 NPAP1Q9NZP6 1156 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 SSR3Q9UNL2 185 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 GRIP1Q9Y3R0 1128 aa12.66□□□□□ -0.38
CSNK1E-201ENST00000359867 A0A0B4J293 547 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 A0A1W2PQL4 384 aaPredicted RBP12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 FRG2CA6NGY1 282 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 IDSB3KWA1 339 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 DDAH2O95865 285 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 CSTAP01040 98 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 MAKP20794 623 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 RNF144AP50876 292 aaPredicted RBP12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 NSDHLQ15738 373 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 OR2G6Q5TZ20 316 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 SLC30A6Q6NXT4 461 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 MRPL14Q6P1L8 145 aaKnown RBP12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 ULK3Q6PHR2 472 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 PAMR1Q6UXH9 720 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 PHC2Q8IXK0 858 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 SLC43A2Q8N370 569 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 NANOGP1Q8N7R0 232 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 ZFP41Q8N8Y5 198 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 ZNF527Q8NB42 609 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 OR52L1Q8NGH7 329 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 OR52I1Q8NGK6 324 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 OR4C3Q8NH37 302 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 PFN4Q8NHR9 129 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 SLC2A12Q8TD20 617 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 SAMD8Q96LT4 415 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 SPRY4Q9C004 299 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 TGIF2Q9GZN2 237 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 OR52D1Q9H346 318 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 UBQLN4Q9NRR5 601 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 SEC14L4Q9UDX3 406 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 ZNF254O75437 659 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 CSF3P09919 207 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 ZNF250P15622 560 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 BMP7P18075 431 aa12.65□□□□□ -0.38
CSNK1E-201ENST00000359867 ETV1P50549 477 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms