RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 LSRQ86X29 649 aaPredicted RBP13.22□□□□□ -0.29
APP-205ENST00000358918 RNF113BQ8IZP6 322 aaKnown RBP13.22□□□□□ -0.29
APP-205ENST00000358918 C12orf76Q8N812 135 aaPredicted RBP13.22□□□□□ -0.29
APP-205ENST00000358918 SNX33Q8WV41 574 aa13.22□□□□□ -0.29
APP-205ENST00000358918 CNRIP1Q96F85 164 aaPredicted RBP13.22□□□□□ -0.29
APP-205ENST00000358918 PDCD1LG2Q9BQ51 273 aa13.22□□□□□ -0.29
APP-205ENST00000358918 PRSS27Q9BQR3 290 aa13.22□□□□□ -0.29
APP-205ENST00000358918 C20orf141Q9NUB4 165 aa13.22□□□□□ -0.29
APP-205ENST00000358918 CLDND1Q9NY35 253 aa13.22□□□□□ -0.29
APP-205ENST00000358918 OR5V1Q9UGF6 321 aa13.22□□□□□ -0.29
APP-205ENST00000358918 GNG8Q9UK08 70 aa13.22□□□□□ -0.29
APP-205ENST00000358918 V9GY05 133 aa13.22□□□□□ -0.29
APP-205ENST00000358918 NUP210Q8TEM1 1887 aaPredicted RBP13.22□□□□□ -0.29
APP-205ENST00000358918 GRXCR1A8MXD5 290 aa13.22□□□□□ -0.29
APP-205ENST00000358918 H0YC42 278 aa13.22□□□□□ -0.29
APP-205ENST00000358918 GPR31O00270 319 aa13.22□□□□□ -0.29
APP-205ENST00000358918 EIF4E2O60573 245 aaKnown RBP13.22□□□□□ -0.29
APP-205ENST00000358918 GP1BAP07359 652 aa13.22□□□□□ -0.29
APP-205ENST00000358918 HNRNPA1P09651 372 aaKnown RBP eCLIP13.22□□□□□ -0.29
APP-205ENST00000358918 CSNK2A2P19784 350 aaPredicted RBP13.22□□□□□ -0.29
APP-205ENST00000358918 RFC3P40938 356 aa13.22□□□□□ -0.29
APP-205ENST00000358918 MNDAP41218 407 aa13.22□□□□□ -0.29
APP-205ENST00000358918 RPE65Q16518 533 aa13.22□□□□□ -0.29
APP-205ENST00000358918 TCEAL5Q5H9L2 206 aa13.22□□□□□ -0.29
APP-205ENST00000358918 ZNF836Q6ZNA1 936 aa13.22□□□□□ -0.29
APP-205ENST00000358918 ZNF546Q86UE3 836 aa13.22□□□□□ -0.29
APP-205ENST00000358918 LDLRAD3Q86YD5 345 aa13.22□□□□□ -0.29
APP-205ENST00000358918 GLB1L2Q8IW92 636 aa13.22□□□□□ -0.29
APP-205ENST00000358918 NRSN1Q8IZ57 195 aa13.22□□□□□ -0.29
APP-205ENST00000358918 ADAMTS15Q8TE58 950 aa13.22□□□□□ -0.29
APP-205ENST00000358918 ZNF707Q96C28 371 aaPredicted RBP13.22□□□□□ -0.29
APP-205ENST00000358918 MRGPRX3Q96LB0 322 aa13.22□□□□□ -0.29
APP-205ENST00000358918 PLEKHM1Q9Y4G2 1056 aa13.22□□□□□ -0.29
APP-205ENST00000358918 KANTRA0A1W2PQU2 76 aa13.21□□□□□ -0.29
APP-205ENST00000358918 TSPAN11A1L157 253 aa13.21□□□□□ -0.29
APP-205ENST00000358918 ACOD1A6NK06 481 aa13.21□□□□□ -0.29
APP-205ENST00000358918 GPRIN2O60269 458 aa13.21□□□□□ -0.29
APP-205ENST00000358918 RBBP9O75884 186 aa13.21□□□□□ -0.29
APP-205ENST00000358918 CALCBP10092 127 aa13.21□□□□□ -0.29
APP-205ENST00000358918 PSMB5P28074 263 aa13.21□□□□□ -0.29
APP-205ENST00000358918 POLR2GP62487 172 aaKnown RBP eCLIP13.21□□□□□ -0.29
APP-205ENST00000358918 DHCR24Q15392 516 aa13.21□□□□□ -0.29
APP-205ENST00000358918 PCGF3Q3KNV8 242 aa13.21□□□□□ -0.29
APP-205ENST00000358918 C4orf46Q504U0 113 aa13.21□□□□□ -0.29
APP-205ENST00000358918 EIPR1Q53HC9 387 aa13.21□□□□□ -0.29
APP-205ENST00000358918 RTL10Q7L3V2 364 aa13.21□□□□□ -0.29
APP-205ENST00000358918 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.21□□□□□ -0.29
APP-205ENST00000358918 PUSL1Q8N0Z8 303 aaKnown RBP13.21□□□□□ -0.29
APP-205ENST00000358918 PHOSPHO2Q8TCD6 241 aa13.21□□□□□ -0.29
APP-205ENST00000358918 NRTNQ99748 197 aa13.21□□□□□ -0.29
APP-205ENST00000358918 ACTRT3Q9BYD9 372 aa13.21□□□□□ -0.29
APP-205ENST00000358918 PITHD1Q9GZP4 211 aaPredicted RBP13.21□□□□□ -0.29
APP-205ENST00000358918 TMEM272A0A1B0GTI8 110 aa13.21□□□□□ -0.3
APP-205ENST00000358918 C17orf113A0A1B0GUU1 675 aa13.21□□□□□ -0.3
APP-205ENST00000358918 PIN1P1O15428 100 aa13.21□□□□□ -0.3
APP-205ENST00000358918 PPP1R3DO95685 299 aa13.21□□□□□ -0.3
APP-205ENST00000358918 PAK4O96013 591 aaPredicted RBP13.21□□□□□ -0.3
APP-205ENST00000358918 IFNGP01579 166 aa13.21□□□□□ -0.3
APP-205ENST00000358918 IFNA4P05014 189 aa13.21□□□□□ -0.3
APP-205ENST00000358918 CTSLP07711 333 aa13.21□□□□□ -0.3
APP-205ENST00000358918 OR2T7P0C7T2 308 aa13.21□□□□□ -0.3
APP-205ENST00000358918 MICBQ29980 383 aa13.21□□□□□ -0.3
APP-205ENST00000358918 ZNF528Q3MIS6 628 aa13.21□□□□□ -0.3
APP-205ENST00000358918 WDR88Q6ZMY6 472 aa13.21□□□□□ -0.3
APP-205ENST00000358918 FRRS1Q6ZNA5 592 aa13.21□□□□□ -0.3
APP-205ENST00000358918 SPAG16Q8N0X2 631 aa13.21□□□□□ -0.3
APP-205ENST00000358918 OR9A2Q8NGT5 310 aa13.21□□□□□ -0.3
APP-205ENST00000358918 OR2T27Q8NH04 317 aa13.21□□□□□ -0.3
APP-205ENST00000358918 MIB2Q96AX9 1013 aa13.21□□□□□ -0.3
APP-205ENST00000358918 ZMYND19Q96E35 227 aaPredicted RBP13.21□□□□□ -0.3
APP-205ENST00000358918 CNN2Q99439 309 aaKnown RBP13.21□□□□□ -0.3
APP-205ENST00000358918 PCBD2Q9H0N5 130 aa13.21□□□□□ -0.3
APP-205ENST00000358918 GAREM1Q9H706 876 aa13.21□□□□□ -0.3
APP-205ENST00000358918 TMEM185BQ9H7F4 350 aa13.21□□□□□ -0.3
APP-205ENST00000358918 SIGLEC7Q9Y286 467 aa13.21□□□□□ -0.3
APP-205ENST00000358918 A0A1W2PR48 441 aa13.2□□□□□ -0.3
APP-205ENST00000358918 TMEM218A2RU14 115 aa13.2□□□□□ -0.3
APP-205ENST00000358918 MPIP34949 423 aa13.2□□□□□ -0.3
APP-205ENST00000358918 VIPR2P41587 438 aa13.2□□□□□ -0.3
APP-205ENST00000358918 LUMP51884 338 aaPredicted RBP13.2□□□□□ -0.3
APP-205ENST00000358918 ZNF136P52737 540 aa13.2□□□□□ -0.3
APP-205ENST00000358918 CLDN2P57739 230 aa13.2□□□□□ -0.3
APP-205ENST00000358918 RPS15P62841 145 aaKnown RBP13.2□□□□□ -0.3
APP-205ENST00000358918 SERTAD2Q14140 314 aa13.2□□□□□ -0.3
APP-205ENST00000358918 GAS6Q14393 721 aa13.2□□□□□ -0.3
APP-205ENST00000358918 TSC22D1Q15714 1073 aa13.2□□□□□ -0.3
APP-205ENST00000358918 SWI5Q1ZZU3 235 aa13.2□□□□□ -0.3
APP-205ENST00000358918 C12orf40Q86WS4 652 aa13.2□□□□□ -0.3
APP-205ENST00000358918 CBLN2Q8IUK8 224 aa13.2□□□□□ -0.3
APP-205ENST00000358918 ARMC10Q8N2F6 343 aa13.2□□□□□ -0.3
APP-205ENST00000358918 ARL14Q8N4G2 192 aa13.2□□□□□ -0.3
APP-205ENST00000358918 C12orf45Q8N5I9 185 aaPredicted RBP13.2□□□□□ -0.3
APP-205ENST00000358918 VN1R2Q8NFZ6 395 aa13.2□□□□□ -0.3
APP-205ENST00000358918 OR4C16Q8NGL9 310 aa13.2□□□□□ -0.3
APP-205ENST00000358918 OR6N1Q8NGY5 312 aa13.2□□□□□ -0.3
APP-205ENST00000358918 OR2L2Q8NH16 312 aa13.2□□□□□ -0.3
APP-205ENST00000358918 BPIFA2Q96DR5 249 aa13.2□□□□□ -0.3
APP-205ENST00000358918 SLC35A4Q96G79 324 aa13.2□□□□□ -0.3
APP-205ENST00000358918 RSPH9Q9H1X1 276 aaPredicted RBP13.2□□□□□ -0.3
APP-205ENST00000358918 OR52A5Q9H2C5 316 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms