RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 CALHM2Q9HA72 323 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 PDP1Q9P0J1 537 aaPredicted RBP13.64□□□□□ -0.23
TPM1-206ENST00000358278 CLCF1Q9UBD9 225 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 ZNF229Q9UJW7 825 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 FAM215AQ9Y5M1 114 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 EFCAB9A8MZ26 197 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 KDM4EB2RXH2 506 aaPredicted RBP13.63□□□□□ -0.23
TPM1-206ENST00000358278 SMAD9O15198 467 aaKnown RBP13.63□□□□□ -0.23
TPM1-206ENST00000358278 STSP08842 583 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 FUT1P19526 365 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 MAKP20794 623 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 OMPP47874 163 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 AGFG1P52594 562 aaKnown RBP13.63□□□□□ -0.23
TPM1-206ENST00000358278 IL1RL1Q01638 556 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 RTL6Q6ICC9 239 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 SHQ1Q6PI26 577 aaKnown RBP13.63□□□□□ -0.23
TPM1-206ENST00000358278 NANOGNBQ7Z5D8 188 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 HS3ST5Q8IZT8 346 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 PQLC1Q8N2U9 271 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 LRRC17Q8N6Y2 441 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 TMEM99Q8N816 258 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 SCAIQ8N9R8 606 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 AQP11Q8NBQ7 271 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 OR5K1Q8NHB7 308 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 PRR7Q8TB68 274 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 SDCCAG3Q96C92 435 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 CHST11Q9NPF2 352 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 SEC14L4Q9UDX3 406 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 RRP15Q9Y3B9 282 aaKnown RBP13.63□□□□□ -0.23
TPM1-206ENST00000358278 FLNCQ14315 2725 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 FREM1Q5H8C1 2179 aa13.63□□□□□ -0.23
TPM1-206ENST00000358278 ALPK2Q86TB3 2170 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 CD8B2A6NJW9 211 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 AQP7P3A6NL99 342 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 G3V2T6 193 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 OR6A2O95222 327 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 TGM6O95932 706 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 ASAH2BP0C7U1 165 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 KLK2P20151 261 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 H3F3AP84243 136 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 PMS2P3Q13401 168 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 EIF2S3LQ2VIR3 472 aaKnown RBP13.62□□□□□ -0.23
TPM1-206ENST00000358278 TMEM225Q6GV28 225 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 PGBD2Q6P3X8 592 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 TMPRSS11FQ6ZWK6 438 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 H1FNTQ75WM6 255 aaPredicted RBP13.62□□□□□ -0.23
TPM1-206ENST00000358278 ZDHHC13Q8IUH4 622 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 CCDC103Q8IW40 242 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 MCEMP1Q8IX19 187 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 SLC43A2Q8N370 569 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 RPRMLQ8N4K4 120 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 OR5J2Q8NH18 312 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 RNF128Q8TEB7 428 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 ABHD3Q8WU67 409 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 WNT2BQ93097 391 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 NRBF2Q96F24 287 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 TM9SF2Q99805 663 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 MRPL39Q9NYK5 338 aaKnown RBP13.62□□□□□ -0.23
TPM1-206ENST00000358278 KIF17Q9P2E2 1029 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 B3GALT5Q9Y2C3 310 aa13.62□□□□□ -0.23
TPM1-206ENST00000358278 ARRDC5A6NEK1 342 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 ZNF814B7Z6K7 855 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 FZD7O75084 574 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 AQP8O94778 261 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 PLGP00747 810 aaPredicted RBP13.61□□□□□ -0.23
TPM1-206ENST00000358278 ADORA3P0DMS8 318 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 POU2F1P14859 743 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 SLC9A3P48764 834 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 PER3P56645 1201 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 GTF2IRD2BQ6EKJ0 949 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 ZNF770Q6IQ21 691 aaPredicted RBP13.61□□□□□ -0.23
TPM1-206ENST00000358278 C1orf94Q6P1W5 598 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 ZER1Q7Z7L7 766 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 OAFQ86UD1 273 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 GPAT4Q86UL3 456 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 GTF2IRD2Q86UP8 949 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 HIPK1Q86Z02 1210 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 SVOPLQ8N434 492 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 OR13C2Q8NGS9 318 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 GNPDA2Q8TDQ7 276 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 DCLRE1BQ9H816 532 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 KLHL9Q9P2J3 617 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 KLHL13Q9P2N7 655 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 OAZ3Q9UMX2 235 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 NCOA6Q14686 2063 aaPredicted RBP13.61□□□□□ -0.23
TPM1-206ENST00000358278 TRAV27A0A087WT01 109 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 SAC3D1A6NKF1 404 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 E9PLN8 166 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 BLOC1S5-TXNDC5H3BN57 136 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 CCL21O00585 134 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 CDC42EP2O14613 210 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 CYTIPO60759 359 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 ANPEPP15144 967 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 AHCYP23526 432 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 FPR3P25089 353 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 RASGEF1BQ0VAM2 473 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 RNPS1Q15287 305 aaKnown RBP13.61□□□□□ -0.23
TPM1-206ENST00000358278 TAF11Q15544 211 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 ABLIM2Q6H8Q1 611 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 STK32CQ86UX6 486 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms