RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 SLC2A9Q9NRM0 540 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 PARP4Q9UKK3 1724 aaKnown RBP9.11□□□□□ -0.95
CHD3-202ENST00000358181 PIAS2O75928 621 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 OPN1MWP04001 364 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 THBS1P07996 1170 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 OPN1MW2P0DN77 364 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 OPN1MW3P0DN78 364 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 STC1P52823 247 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 OR9I1Q8NGQ6 314 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 FAM213BQ8TBF2 198 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 HES4Q9HCC6 221 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 FAM120CQ9NX05 1096 aaKnown RBP9.11□□□□□ -0.95
CHD3-202ENST00000358181 CNIH4Q9P003 139 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 CLEC1BQ9P126 229 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 FZR1Q9UM11 496 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 ZNF736B4DX44 427 aaPredicted RBP9.11□□□□□ -0.95
CHD3-202ENST00000358181 SLC16A7O60669 478 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 ZFAND5O76080 213 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 NSA2O95478 260 aaKnown RBP9.11□□□□□ -0.95
CHD3-202ENST00000358181 FABP1P07148 127 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 RAB15P59190 212 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 TTC9BQ8N6N2 239 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 CANT1Q8WVQ1 401 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 NR4A3Q92570 626 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 STACQ99469 402 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 LRFN3Q9BTN0 628 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 CNTNAP3Q9BZ76 1288 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 GON4LQ3T8J9 2241 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 MYO9BQ13459 2157 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 NALCNQ8IZF0 1738 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 A0A0J9YY10 115 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 A8MT66 165 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 ATXN7O15265 892 aaPredicted RBP9.11□□□□□ -0.95
CHD3-202ENST00000358181 AHSGP02765 367 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 THSD4Q6ZMP0 1018 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 ZNF546Q86UE3 836 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 CDS1Q92903 461 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 SORBS1Q9BX66 1292 aaKnown RBP9.11□□□□□ -0.95
CHD3-202ENST00000358181 FMN2Q9NZ56 1722 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 ZFP92A6NM28 416 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 ATXN1LP0C7T5 689 aaKnown RBP9.11□□□□□ -0.95
CHD3-202ENST00000358181 NQO2P16083 231 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 HNRNPH3P31942 346 aaKnown RBP9.11□□□□□ -0.95
CHD3-202ENST00000358181 TNFSF8P32971 234 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 PCBP3P57721 371 aaKnown RBP9.11□□□□□ -0.95
CHD3-202ENST00000358181 NPY5RQ15761 445 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 TMEM268Q5VZI3 342 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 H2BFWTQ7Z2G1 175 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 DYNLRB2Q8TF09 96 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 CA5BP1Q8WTZ4 195 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 TRUB1Q8WWH5 349 aaKnown RBP9.11□□□□□ -0.95
CHD3-202ENST00000358181 OR5M11Q96RB7 305 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 OR52B2Q96RD2 323 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 ZNF382Q96SR6 550 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 HOXD1Q9GZZ0 328 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 EGLN3Q9H6Z9 239 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 CD93Q9NPY3 652 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 SNED1Q8TER0 1413 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 IGHV3OR16-12A0A075B7B8 117 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 A0A0B4J2A0 478 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 H7C1C5 153 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 GPR137BO60478 399 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 PRSS56P0CW18 603 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 HAPLN1P10915 354 aaPredicted RBP9.1□□□□□ -0.95
CHD3-202ENST00000358181 PRKACBP22694 351 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 AADACP22760 399 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 RAP2BP61225 183 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 LCN6P62502 163 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 HSF5Q4G112 596 aaPredicted RBP9.1□□□□□ -0.95
CHD3-202ENST00000358181 Q6ZRG5 221 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 FBXL14Q8N1E6 418 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 DTWD1Q8N5C7 304 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 GPR119Q8TDV5 335 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 INTS14Q96SY0 518 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 INIPQ9NRY2 104 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 SHPKQ9UHJ6 478 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 SLC5A10A0PJK1 596 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 NUPL2O15504 423 aaKnown RBP9.1□□□□□ -0.95
CHD3-202ENST00000358181 GPR39O43194 453 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 SDC1P18827 310 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 FOXN2P32314 431 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 RFC3P40938 356 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 IL13RA1P78552 427 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 KCNAB2Q13303 367 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 CAMK2BQ13554 666 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 FBXO43Q4G163 708 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 C6orf89Q6UWU4 347 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 PGAP1Q75T13 922 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 VRK2Q86Y07 508 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 GABRG1Q8N1C3 465 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 OR5D16Q8NGK9 328 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 OR5M9Q8NGP3 310 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 OR2T6Q8NHC8 308 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 ZFAND1Q8TCF1 268 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 BIRC7Q96CA5 298 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 APOOQ9BUR5 198 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 CBY3A6NI87 242 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 H3BVH4 76 aa9.1□□□□□ -0.95
CHD3-202ENST00000358181 I6L893 689 aaPredicted RBP9.1□□□□□ -0.95
CHD3-202ENST00000358181 KLK10O43240 276 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms