RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 DDIT4LQ96D03 193 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 C5orf34Q96MH7 638 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 DCBLD2Q96PD2 775 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 POTEKPQ9BYX7 375 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 ZNF703Q9H7S9 590 aaPredicted RBP16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 SERINC1Q9NRX5 453 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 CNOT2Q9NZN8 540 aaKnown RBP16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 NDUFA13Q9P0J0 144 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 SNX5Q9Y5X3 404 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 MGAQ8IWI9 3026 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 SMIM31A0A1B0GVY4 71 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 MCIDASD6RGH6 385 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 RGS10O43665 173 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 NDUFB2O95178 105 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 MT-ATP6P00846 226 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 TFPIP10646 304 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 ZNF17P17021 662 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 JUNBP17275 347 aaPredicted RBP16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 GDF1P27539 372 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 SLC6A6P31641 620 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 AQP2P41181 271 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 SLC15A1P46059 708 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 CD97P48960 835 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 MEOX1P50221 254 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 MLLT10P55197 1068 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 ANKDD1AQ495B1 522 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 GLYR1Q49A26 553 aaPredicted RBP16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 ZNF766Q5HY98 468 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 PRSS48Q7RTY5 328 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 IGFN1Q86VF2 1251 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 LRRC75AQ8NAA5 344 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 OR6S1Q8NH40 331 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 GGHQ92820 318 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 LRR1Q96L50 414 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 RHNO1Q9BSD3 238 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 COPS4Q9BT78 406 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 IFT27Q9BW83 186 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 TTTY12Q9BZ98 90 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 OR2B2Q9GZK3 357 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 VCX3AQ9NNX9 186 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 ERVK-18Q9QC07 812 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 MRPS18CQ9Y3D5 142 aaKnown RBP16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 EFCAB10A6NFE3 127 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 BLOC1S5-TXNDC5H3BN57 136 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 OR2T1O43869 369 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 GLSO94925 669 aaPredicted RBP16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 PPP1R3DO95685 299 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 PIPP12273 146 aaPredicted RBP16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 GRPRP30550 384 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 NUDT6P53370 316 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 PRPS1P60891 318 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 PIGFQ07326 219 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 XAF1Q6GPH4 301 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 AHSA2Q719I0 299 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 MAMDC2Q7Z304 686 aaPredicted RBP16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 MFSD8Q8NHS3 518 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 MYDGFQ969H8 173 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 AMBNQ9NP70 447 aa16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 RPL36Q9Y3U8 105 aaKnown RBP16.34■□□□□ 0.21
SMARCD3-202ENST00000356800 LIPT2A6NK58 231 aa16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 SLC2A10O95528 541 aa16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 IDUAP35475 653 aa16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 RPL18Q07020 188 aaKnown RBP16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 MYBPHQ13203 477 aa16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 WIPI1Q5MNZ9 446 aaPredicted RBP16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 NANOGNBQ7Z5D8 188 aa16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 OR14L1PQ8NHC6 308 aa16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 SLC25A43Q8WUT9 341 aaPredicted RBP16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 PLEKHA8Q96JA3 519 aa16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 ZNF582Q96NG8 517 aaPredicted RBP16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 PIGQQ9BRB3 760 aa16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 FN3KQ9H479 309 aa16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 CMC2Q9NRP2 79 aa16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 TAS2R5Q9NYW4 299 aa16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 DNAJC27Q9NZQ0 273 aa16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 SPIN1Q9Y657 262 aaPredicted RBP16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 ANKRD11Q6UB99 2663 aaPredicted RBP16.33■□□□□ 0.2
SMARCD3-202ENST00000356800 A0A1W2PNR3 127 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 SNTNA6NMZ2 147 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 FAM166BA8MTA8 275 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 KDM4EB2RXH2 506 aaPredicted RBP16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 KLRC4-KLRK1H3BQV0 150 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 K7ENP7 123 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 M0R082 166 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 RRP8O43159 456 aaKnown RBP16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 FZD7O75084 574 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 TRAPPC6AO75865 159 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 HIST1H2ABP04908 130 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 CDK1P06493 297 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 CELA3AP09093 270 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 PCMT1P22061 227 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 SFTPDP35247 375 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 FOXK2Q01167 660 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 OR7A5Q15622 319 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 TMEM176BQ3YBM2 270 aaPredicted RBP16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 SLC35F1Q5T1Q4 408 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 INO80CQ6PI98 192 aaPredicted RBP16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 DPY19L2P2Q6ZN68 376 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 HIST3H2AQ7L7L0 130 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms