RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 AADACP22760 399 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 HBG1P69891 147 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 HBG2P69892 147 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 SAP130Q9H0E3 1048 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 ZNF334Q9HCZ1 680 aaPredicted RBP16.1■□□□□ 0.17
COL27A1-201ENST00000356083 BABAM2Q9NXR7 383 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 PRSS38A1L453 326 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 PMP2P02689 132 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 FOLR1P15328 257 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 HTN1P15515 57 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 GIFP27352 417 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 PPP2CAP67775 309 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 SIRT6Q8N6T7 355 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 MARCH4Q9P2E8 410 aaPredicted RBP16.1■□□□□ 0.17
COL27A1-201ENST00000356083 AJAP1Q9UKB5 411 aaPredicted RBP16.1■□□□□ 0.17
COL27A1-201ENST00000356083 PHF1O43189 567 aaPredicted RBP16.09■□□□□ 0.17
COL27A1-201ENST00000356083 PRKYO43930 277 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 NTF3P20783 257 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 CAMK2BQ13554 666 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 TRILQ7L0X0 811 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 DPH3Q96FX2 82 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 BOD1Q96IK1 185 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 PRRT1Q99946 306 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 NTMT1Q9BV86 223 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 DEFB127Q9H1M4 99 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 DEGS1O15121 323 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 GGT1P19440 569 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 SLC7A9P82251 487 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 OR8G1Q15617 311 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 ZUFSPQ96AP4 578 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 SLC6A20Q9NP91 592 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 WDR37Q9Y2I8 494 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 NFS1Q9Y697 457 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 THBS1P07996 1170 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 LAMP1P11279 417 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 HTR3AP46098 478 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 MANEALQ5VSG8 457 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 ACOT4Q8N9L9 421 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 AGBL5Q8NDL9 886 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 NAT6Q93015 286 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 MYADMQ96S97 322 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 WDR83Q9BRX9 315 aaKnown RBP16.09■□□□□ 0.17
COL27A1-201ENST00000356083 QPCTLQ9NXS2 382 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 SPTBN2O15020 2390 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 DNAJB13P59910 316 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 HACD4Q5VWC8 232 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 HBMQ6B0K9 141 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 UNC5DQ6UXZ4 953 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 TTC9BQ8N6N2 239 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 FUNDC2Q9BWH2 189 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 P2RY12Q9H244 342 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 ZNF337Q9Y3M9 751 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 HTR1EP28566 365 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 DCDP81605 110 aaKnown RBP16.09■□□□□ 0.17
COL27A1-201ENST00000356083 ZNF322Q6U7Q0 402 aaPredicted RBP16.09■□□□□ 0.17
COL27A1-201ENST00000356083 KIAA1958Q8N8K9 716 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 OR4K5Q8NGD3 323 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 OR52E1Q8NGJ3 308 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 UTP4Q969X6 686 aaKnown RBP16.09■□□□□ 0.17
COL27A1-201ENST00000356083 ZMAT3Q9HA38 289 aaKnown RBP16.09■□□□□ 0.17
COL27A1-201ENST00000356083 SSU72Q9NP77 194 aaKnown RBP16.09■□□□□ 0.17
COL27A1-201ENST00000356083 TAAR2Q9P1P5 351 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 AGAP14A8MT82 685 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 GMPRP36959 345 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 SEC22AQ96IW7 307 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 CMTM3Q96MX0 182 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 PLK3Q9H4B4 646 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 LIN7BQ9HAP6 207 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 V9GY05 133 aa16.09■□□□□ 0.17
COL27A1-201ENST00000356083 KIF13AQ9H1H9 1805 aa16.08■□□□□ 0.17
COL27A1-201ENST00000356083 M0R1B8 84 aa16.08■□□□□ 0.17
COL27A1-201ENST00000356083 RASAL1O95294 804 aa16.08■□□□□ 0.17
COL27A1-201ENST00000356083 TIMP1P01033 207 aa16.08■□□□□ 0.17
COL27A1-201ENST00000356083 LTBQ06643 244 aa16.08■□□□□ 0.17
COL27A1-201ENST00000356083 MS4A15Q8N5U1 240 aa16.08■□□□□ 0.17
COL27A1-201ENST00000356083 ENDOVQ8N8Q3 282 aaKnown RBP16.08■□□□□ 0.17
COL27A1-201ENST00000356083 OR56B4Q8NH76 319 aa16.08■□□□□ 0.17
COL27A1-201ENST00000356083 FYTTD1Q96QD9 318 aaKnown RBP16.08■□□□□ 0.17
COL27A1-201ENST00000356083 LMO7Q8WWI1 1683 aa16.08■□□□□ 0.17
COL27A1-201ENST00000356083 H7C1C5 153 aa16.08■□□□□ 0.17
COL27A1-201ENST00000356083 ELLP55199 621 aaPredicted RBP16.08■□□□□ 0.17
COL27A1-201ENST00000356083 LCN6P62502 163 aa16.08■□□□□ 0.17
COL27A1-201ENST00000356083 OR2B11Q5JQS5 317 aa16.08■□□□□ 0.17
COL27A1-201ENST00000356083 IGDCC3Q8IVU1 814 aa16.08■□□□□ 0.17
COL27A1-201ENST00000356083 MBOAT4Q96T53 435 aa16.08■□□□□ 0.17
COL27A1-201ENST00000356083 F5P12259 2224 aa16.08■□□□□ 0.17
COL27A1-201ENST00000356083 WNT11O96014 354 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 MPC1LP0DKB6 136 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 PRKACAP17612 351 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 SSTR2P30874 369 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 HNRNPH3P31942 346 aaKnown RBP16.08■□□□□ 0.16
COL27A1-201ENST00000356083 Q6ZRG5 221 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 NECAP1Q8NC96 275 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 KCNK2O95069 426 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 GPR85P60893 370 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 PM20D2Q8IYS1 436 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 DMAC2Q9NW81 257 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 LUZP4Q9P127 313 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 LOC102724200A0A096LPH7 203 aaPredicted RBP16.08■□□□□ 0.16
COL27A1-201ENST00000356083 FAM166BA8MTA8 275 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms