RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 SGCEO43556 437 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 NDUFS1P28331 727 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 MPIP34949 423 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 PPIAP62937 165 aaKnown RBP17.35■□□□□ 0.37
PRPF39-201ENST00000355765 FAM111BQ6SJ93 734 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 HTR3DQ70Z44 454 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 SVBPQ8N300 66 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 OR1M1Q8NGA1 313 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 GRHL3Q8TE85 626 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 CMTM3Q96MX0 182 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 PELI2Q9HAT8 420 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 KANTRA0A1W2PQU2 76 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 TRAPPC13A5PLN9 417 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 KPNA3O00505 521 aaPredicted RBP17.35■□□□□ 0.37
PRPF39-201ENST00000355765 IMPA2O14732 288 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 SULT1B1O43704 296 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 RBBP9O75884 186 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 ABLIM3O94929 683 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 ACAA1P09110 424 aaPredicted RBP17.35■□□□□ 0.37
PRPF39-201ENST00000355765 CSNK2A2P19784 350 aaPredicted RBP17.35■□□□□ 0.37
PRPF39-201ENST00000355765 OR1Q1Q15612 314 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 PRAMEF8Q5VWM4 474 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 PRAMEF7Q5VXH5 474 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 GAREM2Q75VX8 874 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 DPPA4Q7L190 304 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 CAMKVQ8NCB2 501 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 CALML5Q9NZT1 146 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 TET1Q8NFU7 2136 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 PAK4O96013 591 aaPredicted RBP17.34■□□□□ 0.37
PRPF39-201ENST00000355765 CRYBA1P05813 215 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 PRKAR2AP13861 404 aaKnown RBP17.34■□□□□ 0.37
PRPF39-201ENST00000355765 CBR1P16152 277 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 MAPK3P27361 379 aaPredicted RBP17.34■□□□□ 0.37
PRPF39-201ENST00000355765 CERS1P27544 350 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 GPR1P46091 355 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 TPGS2Q68CL5 300 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 RPL22L1Q6P5R6 122 aaKnown RBP17.34■□□□□ 0.37
PRPF39-201ENST00000355765 BEST3Q8N1M1 668 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 THAP6Q8TBB0 222 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 ZNRF4Q8WWF5 429 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 TNFRSF13CQ96RJ3 184 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 LRIT2A6NDA9 550 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 OLFM2O95897 454 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 GTF2F2P13984 249 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 SMAD2Q15796 467 aaKnown RBP17.34■□□□□ 0.37
PRPF39-201ENST00000355765 TMEM215Q68D42 235 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 TMED4Q7Z7H5 227 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 SLC35F2Q8IXU6 374 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 PCSK9Q8NBP7 692 aaKnown RBP17.34■□□□□ 0.37
PRPF39-201ENST00000355765 RGP1Q92546 391 aaPredicted RBP17.34■□□□□ 0.37
PRPF39-201ENST00000355765 OR52A5Q9H2C5 316 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 TM7SF3Q9NS93 570 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 SAGE1Q9NXZ1 904 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 EPHB3P54753 998 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 SRSF3P84103 164 aaKnown RBP17.34■□□□□ 0.37
PRPF39-201ENST00000355765 JMJD6Q6NYC1 403 aaPredicted RBP17.34■□□□□ 0.37
PRPF39-201ENST00000355765 DCUN1D3Q8IWE4 304 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 ZNF764Q96H86 408 aaPredicted RBP17.34■□□□□ 0.37
PRPF39-201ENST00000355765 VRK1Q99986 396 aaPredicted RBP17.34■□□□□ 0.37
PRPF39-201ENST00000355765 TMEM231Q9H6L2 316 aa17.34■□□□□ 0.37
PRPF39-201ENST00000355765 CACYBPQ9HB71 228 aaKnown RBP17.34■□□□□ 0.37
PRPF39-201ENST00000355765 LEFTY2O00292 366 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 RPP14O95059 124 aaKnown RBP17.33■□□□□ 0.36
PRPF39-201ENST00000355765 FABP1P07148 127 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 FAUP35544 74 aaKnown RBP17.33■□□□□ 0.36
PRPF39-201ENST00000355765 NANOS3P60323 173 aaKnown RBP17.33■□□□□ 0.36
PRPF39-201ENST00000355765 CSNK1G2P78368 415 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 BLOC1S1P78537 153 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 LY6G6FQ5SQ64 297 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 UNQ9370/PRO34162Q6UXP9 181 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 RANBP3LQ86VV4 465 aaPredicted RBP17.33■□□□□ 0.36
PRPF39-201ENST00000355765 TMPRSS12Q86WS5 348 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 CDK20Q8IZL9 346 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 ACOT4Q8N9L9 421 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 ACTRT3Q9BYD9 372 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 XKR8Q9H6D3 395 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 APMAPQ9HDC9 416 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 MEPEQ9NQ76 525 aaPredicted RBP17.33■□□□□ 0.36
PRPF39-201ENST00000355765 NCDNQ9UBB6 729 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 SLC23A2Q9UGH3 650 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 ADAM29Q9UKF5 820 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 CCL26Q9Y258 94 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 SCN2AQ99250 2005 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 A0A1B0GVT2 93 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 OR6C76A6NM76 312 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 SULT1C2O00338 296 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 CCSO14618 274 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 GLSO94925 669 aaPredicted RBP17.33■□□□□ 0.36
PRPF39-201ENST00000355765 RAB40ALP0C0E4 278 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 ZNF806P0C7X5 589 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 NPBWR1P48145 328 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 RAB12Q6IQ22 244 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 RBMS3Q6XE24 437 aaKnown RBP17.33■□□□□ 0.36
PRPF39-201ENST00000355765 PARS2Q7L3T8 475 aaKnown RBP17.33■□□□□ 0.36
PRPF39-201ENST00000355765 CCDC36Q8IYA8 594 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 GLYATL2Q8WU03 294 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 RAB40AQ8WXH6 277 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 MIB2Q96AX9 1013 aa17.33■□□□□ 0.36
PRPF39-201ENST00000355765 CNN2Q99439 309 aaKnown RBP17.33■□□□□ 0.36
PRPF39-201ENST00000355765 PIGMQ9H3S5 423 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms