RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 ERVMER34-1Q9H9K5 563 aa7.51□□□□□ -1.21
HTT-201ENST00000355072 RAB18Q9NP72 206 aa7.51□□□□□ -1.21
HTT-201ENST00000355072 SNRNP70P08621 437 aaKnown RBP7.5□□□□□ -1.21
HTT-201ENST00000355072 GPR85P60893 370 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 RABEPKQ7Z6M1 372 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 ASPGQ86U10 573 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 CPEB3Q8NE35 698 aaKnown RBP7.5□□□□□ -1.21
HTT-201ENST00000355072 DOK1Q99704 481 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 DPH1Q9BZG8 443 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 HOXC13P31276 330 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 GDNFP39905 211 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 TAF10Q12962 218 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 MOGAT2Q3SYC2 334 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 OR6M1Q8NGM8 313 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 TVP23CQ96ET8 276 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 ATP5SQ99766 215 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 ARNT2Q9HBZ2 717 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 PADI1Q9ULC6 663 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 PIAS1O75925 651 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 TFPTP0C1Z6 253 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 CPEP16870 476 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 CLCNKBP51801 687 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 GRB2P62993 217 aaKnown RBP7.5□□□□□ -1.21
HTT-201ENST00000355072 ARHGAP40Q5TG30 622 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 LAX1Q8IWV1 398 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 FUBP1Q96AE4 644 aaKnown RBP7.5□□□□□ -1.21
HTT-201ENST00000355072 SPTAN1Q13813 2472 aaKnown RBP7.5□□□□□ -1.21
HTT-201ENST00000355072 TRAV1-2A0A0B4J238 106 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 SH3BGRLO75368 114 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 CLEC3AO75596 197 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 MT-ND4P03905 459 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 TEX30Q5JUR7 227 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 SIGIRRQ6IA17 410 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 OR4C11Q6IEV9 310 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 CADM3Q8N126 398 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 FZD8Q9H461 694 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 MDC1Q14676 2089 aaKnown RBP7.5□□□□□ -1.21
HTT-201ENST00000355072 DOCK4Q8N1I0 1966 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 EPHA4P54764 986 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 MC1RQ01726 317 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 OR52B6Q8NGF0 335 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 SMPDL3BQ92485 455 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 ZNF236Q9UL36 1845 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 EDNRBP24530 442 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 PARGQ86W56 976 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 NLGN4YQ8NFZ3 816 aaPredicted RBP7.5□□□□□ -1.21
HTT-201ENST00000355072 NEURL3Q96EH8 262 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 STACQ99469 402 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 LRFN3Q9BTN0 628 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 GABARAPL3Q9BY60 117 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 EPHX3Q9H6B9 360 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 ARPC1BO15143 372 aaKnown RBP7.5□□□□□ -1.21
HTT-201ENST00000355072 USP2O75604 605 aaPredicted RBP7.5□□□□□ -1.21
HTT-201ENST00000355072 TNFP01375 233 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 TNFRSF17Q02223 184 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 TSPAN31Q12999 210 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 ADIRFQ15847 76 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 DCXRQ7Z4W1 244 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 OR5AP2Q8NGF4 316 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 SDSLQ96GA7 329 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 NENFQ9UMX5 172 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 TSC2P49815 1807 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 ANKUB1A6NFN9 424 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 RRASP10301 218 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 ASCL1P50553 236 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 ADPRHP54922 357 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 COL19A1Q14993 1142 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 PDGFRLQ15198 375 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 SSX1Q16384 188 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 TMEM151AQ8N4L1 468 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 OR13C9Q8NGT0 318 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 EMG1Q92979 244 aaKnown RBP7.5□□□□□ -1.21
HTT-201ENST00000355072 C4orf36Q96KX1 117 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 CRB3Q9BUF7 120 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 BEX2Q9BXY8 128 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 PURGQ9UJV8 347 aaKnown RBP7.5□□□□□ -1.21
HTT-201ENST00000355072 FLVCR2Q9UPI3 526 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 TRHRP34981 398 aaPredicted RBP7.5□□□□□ -1.21
HTT-201ENST00000355072 DCTP40126 519 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 SLC11A1P49279 550 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 ZNF280AP59817 542 aaPredicted RBP7.5□□□□□ -1.21
HTT-201ENST00000355072 ERVS71-1P61550 626 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 UEVLDQ8IX04 471 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 NUP43Q8NFH3 380 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 OR4K15Q8NH41 348 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 CMTM2Q8TAZ6 248 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 ZBTB45Q96K62 511 aaPredicted RBP7.5□□□□□ -1.21
HTT-201ENST00000355072 ENKD1Q9H0I2 346 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 MMP28Q9H239 520 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 ZFP37Q9Y6Q3 630 aaPredicted RBP7.5□□□□□ -1.21
HTT-201ENST00000355072 BRINP1O60477 761 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 SERPINA5P05154 406 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 BAXQ07812 192 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 SLC10A1Q14973 349 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 CLIP3Q96DZ5 547 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 SMIM19Q96E16 107 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 C12orf42Q96LP6 360 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 SRPK3Q9UPE1 567 aa7.5□□□□□ -1.21
HTT-201ENST00000355072 TRAV18A0A075B6X5 111 aa7.49□□□□□ -1.21
HTT-201ENST00000355072 SLC9B1P1A6NJY1 282 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms