RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 GLS2Q9UI32 602 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 FBXW2Q9UKT8 454 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 IGHV5-10-1A0A0J9YXX1 117 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 HYKKA2RU49 373 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 CXorf65A6NEN9 183 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 OR6C65A6NJZ3 312 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 TNFRSF11BO00300 401 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 CCNB2O95067 398 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 C6orf47O95873 294 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 PPT1P50897 306 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 KCNAB1Q14722 419 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 SSX2Q16385 188 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 NDUFA9Q16795 377 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 BEX5Q5H9J7 111 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 OR5M10Q6IEU7 315 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 ZNF621Q6ZSS3 439 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 ZNF367Q7RTV3 350 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 DPPA2Q7Z7J5 298 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 LDLRAD3Q86YD5 345 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 SLC30A8Q8IWU4 369 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 PUSL1Q8N0Z8 303 aaKnown RBP9.28□□□□□ -0.92
SYNE1-203ENST00000354674 PRSS33Q8NF86 280 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 OR4A15Q8NGL6 344 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 OR14A16Q8NHC5 309 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 HSD17B8Q92506 261 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 POM121Q96HA1 1249 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 ARL5BQ96KC2 179 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 ZNF681Q96N22 645 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 PRRX2Q99811 253 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 THAP7Q9BT49 309 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-203ENST00000354674 FAM86C1Q9NVL1 165 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 MYEF2Q9P2K5 600 aaKnown RBP9.28□□□□□ -0.92
SYNE1-203ENST00000354674 D6RAR5 112 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 AIPO00170 330 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 OIP5O43482 229 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 NSA2O95478 260 aaKnown RBP9.28□□□□□ -0.92
SYNE1-203ENST00000354674 NR2F6P10588 404 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 CD59P13987 128 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 FOLR1P15328 257 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 BUD31P41223 144 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-203ENST00000354674 ZP1P60852 638 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 SPIBQ01892 262 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 GAB1Q13480 694 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 GK2Q14410 553 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-203ENST00000354674 SF3A2Q15428 464 aaKnown RBP9.28□□□□□ -0.92
SYNE1-203ENST00000354674 GFOD2Q3B7J2 385 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 Q6ZTK2 550 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 MED25Q71SY5 747 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 SLITRK4Q8IW52 837 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 OR1M1Q8NGA1 313 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 THAP6Q8TBB0 222 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 RXFP4Q8TDU9 374 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 ZNF501Q96CX3 271 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-203ENST00000354674 CACNG6Q9BXT2 260 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 CHST8Q9H2A9 424 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 C5AR2Q9P296 337 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 STUB1Q9UNE7 303 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 CABIN1Q9Y6J0 2220 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 A0A1W2PPE3 182 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 H3BN98 237 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 TRIM3O75382 744 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-203ENST00000354674 ELK1P19419 428 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 RIDAP52758 137 aaKnown RBP9.28□□□□□ -0.92
SYNE1-203ENST00000354674 MVDP53602 400 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 RAB38P57729 211 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 FAAP20Q6NZ36 180 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 UNQ6494/PRO21346Q6UXR6 183 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 SERPINA11Q86U17 422 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 NAA40Q86UY6 237 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 PDZD9Q8IXQ8 264 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 IQCF1Q8N6M8 205 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 TMEM185AQ8NFB2 350 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 OR10G2Q8NGC3 310 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 OR1L3Q8NH93 324 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 SUN3Q8TAQ9 357 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 KCTD12Q96CX2 325 aaKnown RBP9.28□□□□□ -0.92
SYNE1-203ENST00000354674 CNRIP1Q96F85 164 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-203ENST00000354674 AMDHD1Q96NU7 426 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 OR10A4Q9H209 315 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 PPP1R3EQ9H7J1 279 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 SIRT3Q9NTG7 399 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-203ENST00000354674 NTMQ9P121 344 aa9.28□□□□□ -0.92
SYNE1-203ENST00000354674 FAM220BPB1ANY3 271 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 H0YIG0 161 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 CLIC1O00299 241 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 PPIBP23284 216 aaKnown RBP9.27□□□□□ -0.93
SYNE1-203ENST00000354674 SOX18P35713 384 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 PPM1FP49593 454 aaPredicted RBP9.27□□□□□ -0.93
SYNE1-203ENST00000354674 LIMK1P53667 647 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 FABP9Q0Z7S8 132 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 PTGES3Q15185 160 aaKnown RBP9.27□□□□□ -0.93
SYNE1-203ENST00000354674 USF2Q15853 346 aaPredicted RBP9.27□□□□□ -0.93
SYNE1-203ENST00000354674 CRB2Q5IJ48 1285 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 YOD1Q5VVQ6 348 aaPredicted RBP9.27□□□□□ -0.93
SYNE1-203ENST00000354674 PLAG1Q6DJT9 500 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 TMEM107Q6UX40 140 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 PRSS45Q7RTY3 260 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 OR9A4Q8NGU2 314 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 OR1S1Q8NH92 325 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 CREB3L1Q96BA8 519 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms