RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 HRH4Q9H3N8 390 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 POFUT1Q9H488 388 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 C20orf141Q9NUB4 165 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 GHRLQ9UBU3 117 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 SLC25A13Q9UJS0 675 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 FBXO4Q9UKT5 387 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 FAM96BQ9Y3D0 163 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 SLC5A10A0PJK1 596 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 METTL21EPA6NDL7 271 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 FAM171A2A8MVW0 826 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 IDSB3KWA1 339 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 POP7O75817 140 aaKnown RBP7.03□□□□□ -1.28
BRCA1-201ENST00000352993 S100A8P05109 93 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 SMIM6P0DI80 62 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 MAKP20794 623 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 BSGP35613 385 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 MC3RP41968 323 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 FABP9Q0Z7S8 132 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 FNDC3BQ53EP0 1204 aaKnown RBP7.03□□□□□ -1.28
BRCA1-201ENST00000352993 KRBOX4Q5JUW0 171 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 FAM46CQ5VWP2 391 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 GLT8D1Q68CQ7 371 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 GDPD4Q6W3E5 623 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 PGAP1Q75T13 922 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 CASTOR1Q8WTX7 329 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 NR4A3Q92570 626 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 GAREM1Q9H706 876 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 ADGRL4Q9HBW9 690 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 OR2S2Q9NQN1 319 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 OR5V1Q9UGF6 321 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 LTBP2Q14767 1821 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 C13orf42A0A1B0GVH6 325 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 EEF1E1-BLOC1S5C9J1V9 151 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 EIF1BO60739 113 aaKnown RBP7.03□□□□□ -1.28
BRCA1-201ENST00000352993 LY86O95711 162 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 IFNGP01579 166 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 RPN2P04844 631 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 ELFN1P0C7U0 828 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 TYRP1P17643 537 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 CD34P28906 385 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 RPL4P36578 427 aaKnown RBP7.03□□□□□ -1.28
BRCA1-201ENST00000352993 MNDAP41218 407 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 EIF1P41567 113 aaKnown RBP7.03□□□□□ -1.28
BRCA1-201ENST00000352993 PGDP52209 483 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 SRSF3P84103 164 aaKnown RBP7.03□□□□□ -1.28
BRCA1-201ENST00000352993 FUT5Q11128 374 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 AIMP2Q13155 320 aaKnown RBP7.03□□□□□ -1.28
BRCA1-201ENST00000352993 COL19A1Q14993 1142 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 PLEKHN1Q494U1 663 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-201ENST00000352993 OLFML2AQ68BL7 652 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 MAMSTRQ6ZN01 415 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 NUDT18Q6ZVK8 323 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 KCTD9Q7L273 389 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 DCUN1D3Q8IWE4 304 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 OR5AR1Q8NGP9 310 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 TSPAN10Q9H1Z9 355 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-201ENST00000352993 PLEKHA1Q9HB21 404 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 BCL2L10Q9HD36 194 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 DZANK1Q9NVP4 752 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 GTF2A1LQ9UNN4 478 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 WDR45Q9Y484 360 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 COL4A4P53420 1690 aaPredicted RBP7.02□□□□□ -1.28
BRCA1-201ENST00000352993 A0A1W2PS29 197 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 ICOSLGO75144 302 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 CD3DP04234 171 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 RAB40ALP0C0E4 278 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 MAPK3P27361 379 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-201ENST00000352993 PRKXP51817 358 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 PDX1P52945 283 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 MRPS10P82664 201 aaKnown RBP7.02□□□□□ -1.29
BRCA1-201ENST00000352993 LTBQ06643 244 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 ARSIQ5FYB1 569 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 PWWP2BQ6NUJ5 590 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 UQCC3Q6UW78 93 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 RANBP3LQ86VV4 465 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-201ENST00000352993 TMEM173Q86WV6 379 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-201ENST00000352993 ARMC10Q8N2F6 343 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 EID2Q8N6I1 236 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 WDSUB1Q8N9V3 476 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 TMEM239Q8WW34 195 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 RAB40AQ8WXH6 277 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF689Q96CS4 500 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-201ENST00000352993 SPSB2Q99619 263 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 MS4A8Q9BY19 250 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 APMAPQ9HDC9 416 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 ST6GALNAC2Q9UJ37 374 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 SLC35A3Q9Y2D2 325 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 NPIPA5A0A0B4J1W7 369 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 A0A0B4J2A0 478 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 TMEM272A0A1B0GTI8 110 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 TRAPPC13A5PLN9 417 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 C5orf51A6NDU8 294 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 NPIPA7E9PJI5 369 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 J3QRE1 110 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 M0QYG6 137 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 BCL2L11O43521 198 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 AKAIN1P0CW23 69 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 NPIPA8P0DM63 369 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 ADCYAP1P18509 176 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 SLC11A1P49279 550 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms